Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2849 and DvMF_2850 are separated by 256 nucleotides DvMF_2850 and DvMF_2851 are separated by 430 nucleotides
DvMF_2849: DvMF_2849 - protein of unknown function DUF161 (RefSeq), at 3,601,299 to 3,602,165
_2849
DvMF_2850: DvMF_2850 - hypothetical protein (RefSeq), at 3,602,422 to 3,603,507
_2850
DvMF_2851: DvMF_2851 - diguanylate cyclase and serine/threonine protein kinase with TPR repeats (RefSeq), at 3,603,938 to 3,606,361
_2851
Position (kb)
3602
3603
3604 Strain fitness (log2 ratio)
-1
0
1 at 3601.575 kb on + strand, within DvMF_2849 at 3601.583 kb on - strand, within DvMF_2849 at 3601.674 kb on - strand, within DvMF_2849 at 3602.070 kb on - strand, within DvMF_2849 at 3602.166 kb on + strand at 3602.174 kb on - strand at 3602.210 kb on - strand at 3602.403 kb on + strand at 3602.411 kb on - strand at 3602.815 kb on - strand, within DvMF_2850 at 3602.841 kb on + strand, within DvMF_2850 at 3602.841 kb on + strand, within DvMF_2850 at 3602.873 kb on - strand, within DvMF_2850 at 3603.132 kb on + strand, within DvMF_2850 at 3603.643 kb on + strand at 3603.643 kb on + strand at 3603.651 kb on - strand at 3603.651 kb on - strand at 3603.797 kb on + strand at 3603.994 kb on + strand at 3604.002 kb on + strand at 3604.193 kb on + strand, within DvMF_2851 at 3604.266 kb on + strand, within DvMF_2851 at 3604.432 kb on + strand, within DvMF_2851
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,601,575 + DvMF_2849 0.32 +0.4 3,601,583 - DvMF_2849 0.33 -0.6 3,601,674 - DvMF_2849 0.43 -1.0 3,602,070 - DvMF_2849 0.89 -0.3 3,602,166 + -0.2 3,602,174 - -0.9 3,602,210 - -0.6 3,602,403 + -0.6 3,602,411 - -0.7 3,602,815 - DvMF_2850 0.36 -0.6 3,602,841 + DvMF_2850 0.39 +0.2 3,602,841 + DvMF_2850 0.39 +0.3 3,602,873 - DvMF_2850 0.42 -0.4 3,603,132 + DvMF_2850 0.65 +0.9 3,603,643 + -0.1 3,603,643 + -1.4 3,603,651 - -0.2 3,603,651 - -0.6 3,603,797 + -0.4 3,603,994 + -1.3 3,604,002 + -0.4 3,604,193 + DvMF_2851 0.11 -0.8 3,604,266 + DvMF_2851 0.14 -1.4 3,604,432 + DvMF_2851 0.20 -1.3
Or see this region's nucleotide sequence