Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2802 and DvMF_2803 are separated by 135 nucleotides DvMF_2803 and DvMF_2804 are separated by 121 nucleotides DvMF_2804 and DvMF_2805 are separated by 132 nucleotides
DvMF_2802: DvMF_2802 - transport-associated (RefSeq), at 3,545,474 to 3,546,028
_2802
DvMF_2803: DvMF_2803 - Rubredoxin-type Fe(Cys)4 protein (RefSeq), at 3,546,164 to 3,546,322
_2803
DvMF_2804: DvMF_2804 - chromate transporter, chromate ion transporter (CHR) family (RefSeq), at 3,546,444 to 3,547,856
_2804
DvMF_2805: DvMF_2805 - ChrB protein (RefSeq), at 3,547,989 to 3,549,080
_2805
Position (kb)
3546
3547
3548 Strain fitness (log2 ratio)
-1
0
1 at 3545.560 kb on + strand, within DvMF_2802 at 3545.603 kb on + strand, within DvMF_2802 at 3545.608 kb on + strand, within DvMF_2802 at 3545.642 kb on - strand, within DvMF_2802 at 3545.673 kb on + strand, within DvMF_2802 at 3545.680 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.764 kb on + strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.772 kb on - strand, within DvMF_2802 at 3545.796 kb on + strand, within DvMF_2802 at 3545.860 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.883 kb on + strand, within DvMF_2802 at 3545.906 kb on - strand, within DvMF_2802 at 3545.914 kb on - strand, within DvMF_2802 at 3546.044 kb on + strand at 3546.202 kb on - strand, within DvMF_2803 at 3546.356 kb on - strand at 3546.578 kb on + strand at 3546.581 kb on - strand at 3546.583 kb on + strand at 3546.850 kb on + strand, within DvMF_2804 at 3546.902 kb on + strand, within DvMF_2804 at 3546.978 kb on + strand, within DvMF_2804 at 3546.993 kb on + strand, within DvMF_2804 at 3547.021 kb on - strand, within DvMF_2804 at 3547.492 kb on + strand, within DvMF_2804 at 3547.492 kb on + strand, within DvMF_2804 at 3547.500 kb on - strand, within DvMF_2804 at 3547.663 kb on - strand, within DvMF_2804 at 3548.119 kb on - strand, within DvMF_2805 at 3548.125 kb on - strand, within DvMF_2805 at 3548.133 kb on - strand, within DvMF_2805 at 3548.187 kb on + strand, within DvMF_2805 at 3548.192 kb on + strand, within DvMF_2805 at 3548.559 kb on - strand, within DvMF_2805 at 3548.791 kb on + strand, within DvMF_2805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,545,560 + DvMF_2802 0.15 -0.5 3,545,603 + DvMF_2802 0.23 -0.3 3,545,608 + DvMF_2802 0.24 -0.5 3,545,642 - DvMF_2802 0.30 -0.0 3,545,673 + DvMF_2802 0.36 +0.4 3,545,680 + DvMF_2802 0.37 +0.7 3,545,764 + DvMF_2802 0.52 -0.7 3,545,764 + DvMF_2802 0.52 -0.4 3,545,772 - DvMF_2802 0.54 -0.8 3,545,772 - DvMF_2802 0.54 -1.2 3,545,796 + DvMF_2802 0.58 -0.6 3,545,860 + DvMF_2802 0.70 -0.1 3,545,883 + DvMF_2802 0.74 -0.4 3,545,883 + DvMF_2802 0.74 -1.1 3,545,906 - DvMF_2802 0.78 -0.4 3,545,914 - DvMF_2802 0.79 +0.4 3,546,044 + -1.0 3,546,202 - DvMF_2803 0.24 -1.4 3,546,356 - -0.6 3,546,578 + -0.6 3,546,581 - -1.1 3,546,583 + -0.6 3,546,850 + DvMF_2804 0.29 +0.2 3,546,902 + DvMF_2804 0.32 -1.3 3,546,978 + DvMF_2804 0.38 -0.1 3,546,993 + DvMF_2804 0.39 -0.8 3,547,021 - DvMF_2804 0.41 +1.0 3,547,492 + DvMF_2804 0.74 -0.6 3,547,492 + DvMF_2804 0.74 -0.8 3,547,500 - DvMF_2804 0.75 +0.6 3,547,663 - DvMF_2804 0.86 -0.5 3,548,119 - DvMF_2805 0.12 -0.5 3,548,125 - DvMF_2805 0.12 -1.3 3,548,133 - DvMF_2805 0.13 -0.7 3,548,187 + DvMF_2805 0.18 -0.6 3,548,192 + DvMF_2805 0.19 -0.7 3,548,559 - DvMF_2805 0.52 -1.3 3,548,791 + DvMF_2805 0.73 -0.5
Or see this region's nucleotide sequence