Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2783 and DvMF_2784 are separated by 178 nucleotides DvMF_2784 and DvMF_2785 are separated by 536 nucleotides
DvMF_2783: DvMF_2783 - acetate/CoA ligase (RefSeq), at 3,521,097 to 3,523,052
_2783
DvMF_2784: DvMF_2784 - two component transcriptional regulator, LytTR family (RefSeq), at 3,523,231 to 3,524,307
_2784
DvMF_2785: DvMF_2785 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,524,844 to 3,526,868
_2785
Position (kb)
3523
3524
3525 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3522.518 kb on - strand, within DvMF_2783 at 3522.615 kb on + strand, within DvMF_2783 at 3522.746 kb on - strand, within DvMF_2783 at 3522.970 kb on + strand at 3522.973 kb on - strand at 3523.056 kb on - strand at 3523.170 kb on + strand at 3523.537 kb on + strand, within DvMF_2784 at 3523.545 kb on - strand, within DvMF_2784 at 3523.594 kb on - strand, within DvMF_2784 at 3523.611 kb on - strand, within DvMF_2784 at 3523.657 kb on + strand, within DvMF_2784 at 3523.673 kb on - strand, within DvMF_2784 at 3523.877 kb on + strand, within DvMF_2784 at 3523.914 kb on + strand, within DvMF_2784 at 3523.980 kb on + strand, within DvMF_2784 at 3524.019 kb on + strand, within DvMF_2784 at 3524.169 kb on - strand, within DvMF_2784 at 3524.418 kb on + strand at 3524.722 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,522,518 - DvMF_2783 0.73 -2.5 3,522,615 + DvMF_2783 0.78 -0.4 3,522,746 - DvMF_2783 0.84 -1.4 3,522,970 + -2.3 3,522,973 - -2.3 3,523,056 - -0.9 3,523,170 + -0.2 3,523,537 + DvMF_2784 0.28 -2.9 3,523,545 - DvMF_2784 0.29 -3.5 3,523,594 - DvMF_2784 0.34 -2.5 3,523,611 - DvMF_2784 0.35 -2.4 3,523,657 + DvMF_2784 0.40 -4.7 3,523,673 - DvMF_2784 0.41 -3.2 3,523,877 + DvMF_2784 0.60 -2.1 3,523,914 + DvMF_2784 0.63 -2.6 3,523,980 + DvMF_2784 0.70 -3.7 3,524,019 + DvMF_2784 0.73 -2.8 3,524,169 - DvMF_2784 0.87 +0.4 3,524,418 + +0.1 3,524,722 + +0.4
Or see this region's nucleotide sequence