Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2760 and DvMF_2761 are separated by 262 nucleotides DvMF_2761 and DvMF_2762 are separated by 209 nucleotides DvMF_2762 and DvMF_2763 are separated by 460 nucleotides
DvMF_2760: DvMF_2760 - hypothetical protein (RefSeq), at 3,490,625 to 3,491,650
_2760
DvMF_2761: DvMF_2761 - hypothetical protein (RefSeq), at 3,491,913 to 3,492,314
_2761
DvMF_2762: DvMF_2762 - diguanylate cyclase with hemerythrin-like metal-binding domain (RefSeq), at 3,492,524 to 3,494,419
_2762
DvMF_2763: DvMF_2763 - ABC-type tungstate transport system, permease component (RefSeq), at 3,494,880 to 3,495,704
_2763
Position (kb)
3492
3493
3494
3495 Strain fitness (log2 ratio)
-2
-1
0
1 at 3491.591 kb on - strand at 3491.683 kb on - strand at 3491.903 kb on + strand at 3491.970 kb on + strand, within DvMF_2761 at 3492.574 kb on - strand at 3492.665 kb on - strand at 3492.935 kb on + strand, within DvMF_2762 at 3493.066 kb on + strand, within DvMF_2762 at 3493.074 kb on - strand, within DvMF_2762 at 3493.160 kb on + strand, within DvMF_2762 at 3493.359 kb on + strand, within DvMF_2762 at 3493.458 kb on + strand, within DvMF_2762 at 3493.565 kb on + strand, within DvMF_2762 at 3493.575 kb on + strand, within DvMF_2762 at 3493.669 kb on - strand, within DvMF_2762 at 3493.823 kb on - strand, within DvMF_2762 at 3493.874 kb on - strand, within DvMF_2762 at 3493.908 kb on + strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3493.916 kb on - strand, within DvMF_2762 at 3494.144 kb on - strand, within DvMF_2762 at 3494.265 kb on - strand at 3494.286 kb on - strand at 3494.429 kb on - strand at 3494.472 kb on + strand at 3494.472 kb on + strand at 3494.480 kb on - strand at 3494.664 kb on + strand at 3494.665 kb on - strand at 3494.957 kb on - strand at 3494.957 kb on - strand at 3495.097 kb on - strand, within DvMF_2763 at 3495.107 kb on - strand, within DvMF_2763 at 3495.216 kb on - strand, within DvMF_2763 at 3495.320 kb on + strand, within DvMF_2763
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,491,591 - -1.5 3,491,683 - +0.4 3,491,903 + -1.5 3,491,970 + DvMF_2761 0.14 -0.8 3,492,574 - +0.1 3,492,665 - +0.5 3,492,935 + DvMF_2762 0.22 +0.2 3,493,066 + DvMF_2762 0.29 +1.2 3,493,074 - DvMF_2762 0.29 +0.7 3,493,160 + DvMF_2762 0.34 +0.4 3,493,359 + DvMF_2762 0.44 +0.3 3,493,458 + DvMF_2762 0.49 +0.5 3,493,565 + DvMF_2762 0.55 +0.6 3,493,575 + DvMF_2762 0.55 +0.2 3,493,669 - DvMF_2762 0.60 +0.9 3,493,823 - DvMF_2762 0.69 -0.1 3,493,874 - DvMF_2762 0.71 -1.9 3,493,908 + DvMF_2762 0.73 -0.1 3,493,916 - DvMF_2762 0.73 +0.3 3,493,916 - DvMF_2762 0.73 +0.4 3,493,916 - DvMF_2762 0.73 +0.2 3,494,144 - DvMF_2762 0.85 +0.3 3,494,265 - +0.4 3,494,286 - -0.1 3,494,429 - +0.1 3,494,472 + -0.3 3,494,472 + -0.6 3,494,480 - +0.0 3,494,664 + +0.2 3,494,665 - -0.8 3,494,957 - -0.5 3,494,957 - -0.9 3,495,097 - DvMF_2763 0.26 -0.7 3,495,107 - DvMF_2763 0.28 -2.1 3,495,216 - DvMF_2763 0.41 -1.0 3,495,320 + DvMF_2763 0.53 +0.1
Or see this region's nucleotide sequence