Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2758 and DvMF_2759 are separated by 705 nucleotides
DvMF_2758: DvMF_2758 - diguanylate cyclase with PAS/PAC sensor (RefSeq), at 3,484,444 to 3,486,540
_2758
DvMF_2759: DvMF_2759 - protein of unknown function DUF255 (RefSeq), at 3,487,246 to 3,489,516
_2759
Position (kb)
3487
3488
3489
3490 Strain fitness (log2 ratio)
-1
0
1
2 at 3486.389 kb on - strand at 3486.485 kb on + strand at 3486.567 kb on - strand at 3486.992 kb on - strand at 3487.043 kb on + strand at 3487.086 kb on + strand at 3487.086 kb on + strand at 3487.098 kb on + strand at 3487.176 kb on - strand at 3487.370 kb on - strand at 3487.390 kb on - strand at 3487.468 kb on + strand at 3487.574 kb on + strand, within DvMF_2759 at 3487.648 kb on + strand, within DvMF_2759 at 3487.666 kb on - strand, within DvMF_2759 at 3487.673 kb on + strand, within DvMF_2759 at 3487.681 kb on - strand, within DvMF_2759 at 3488.015 kb on - strand, within DvMF_2759 at 3488.162 kb on - strand, within DvMF_2759 at 3488.162 kb on - strand, within DvMF_2759 at 3488.167 kb on - strand, within DvMF_2759 at 3488.206 kb on + strand, within DvMF_2759 at 3488.209 kb on + strand, within DvMF_2759 at 3488.257 kb on + strand, within DvMF_2759 at 3488.324 kb on - strand, within DvMF_2759 at 3488.332 kb on - strand, within DvMF_2759 at 3488.357 kb on - strand, within DvMF_2759 at 3488.464 kb on + strand, within DvMF_2759 at 3488.530 kb on + strand, within DvMF_2759 at 3488.570 kb on + strand, within DvMF_2759 at 3488.570 kb on + strand, within DvMF_2759 at 3488.570 kb on + strand, within DvMF_2759 at 3489.043 kb on + strand, within DvMF_2759 at 3489.045 kb on + strand, within DvMF_2759 at 3489.316 kb on - strand at 3489.328 kb on - strand at 3489.584 kb on + strand at 3489.626 kb on + strand at 3489.660 kb on + strand at 3489.668 kb on - strand at 3489.680 kb on + strand at 3489.893 kb on - strand at 3489.893 kb on - strand at 3489.903 kb on - strand at 3490.123 kb on + strand at 3490.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,486,389 - -0.3 3,486,485 + +0.5 3,486,567 - -0.0 3,486,992 - +0.4 3,487,043 + -0.4 3,487,086 + +0.4 3,487,086 + -0.1 3,487,098 + -0.6 3,487,176 - -1.2 3,487,370 - -1.0 3,487,390 - -1.0 3,487,468 + -0.5 3,487,574 + DvMF_2759 0.14 -0.4 3,487,648 + DvMF_2759 0.18 -0.9 3,487,666 - DvMF_2759 0.18 -1.0 3,487,673 + DvMF_2759 0.19 -0.6 3,487,681 - DvMF_2759 0.19 -0.7 3,488,015 - DvMF_2759 0.34 -1.6 3,488,162 - DvMF_2759 0.40 -0.8 3,488,162 - DvMF_2759 0.40 -1.6 3,488,167 - DvMF_2759 0.41 -0.1 3,488,206 + DvMF_2759 0.42 -0.7 3,488,209 + DvMF_2759 0.42 -0.2 3,488,257 + DvMF_2759 0.45 -0.5 3,488,324 - DvMF_2759 0.47 -1.3 3,488,332 - DvMF_2759 0.48 -0.6 3,488,357 - DvMF_2759 0.49 -0.1 3,488,464 + DvMF_2759 0.54 -0.8 3,488,530 + DvMF_2759 0.57 -0.4 3,488,570 + DvMF_2759 0.58 -0.9 3,488,570 + DvMF_2759 0.58 -0.8 3,488,570 + DvMF_2759 0.58 +2.2 3,489,043 + DvMF_2759 0.79 -0.5 3,489,045 + DvMF_2759 0.79 -0.8 3,489,316 - -0.6 3,489,328 - +0.0 3,489,584 + -0.2 3,489,626 + -1.3 3,489,660 + -0.2 3,489,668 - -0.6 3,489,680 + -0.0 3,489,893 - +0.1 3,489,893 - -0.7 3,489,903 - -0.7 3,490,123 + -0.6 3,490,287 + -0.6
Or see this region's nucleotide sequence