Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2691 and DvMF_2692 overlap by 4 nucleotides DvMF_2692 and DvMF_2693 are separated by 195 nucleotides
DvMF_2691: DvMF_2691 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq), at 3,404,242 to 3,405,747
_2691
DvMF_2692: DvMF_2692 - dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq), at 3,405,744 to 3,406,334
_2692
DvMF_2693: DvMF_2693 - histidine kinase (RefSeq), at 3,406,530 to 3,408,245
_2693
Position (kb)
3405
3406
3407 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3404.788 kb on - strand, within DvMF_2691 at 3404.931 kb on + strand, within DvMF_2691 at 3405.113 kb on + strand, within DvMF_2691 at 3405.243 kb on + strand, within DvMF_2691 at 3405.313 kb on - strand, within DvMF_2691 at 3405.481 kb on - strand, within DvMF_2691 at 3405.502 kb on - strand, within DvMF_2691 at 3405.867 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.975 kb on - strand, within DvMF_2692 at 3405.980 kb on + strand, within DvMF_2692 at 3405.988 kb on - strand, within DvMF_2692 at 3406.028 kb on + strand, within DvMF_2692 at 3406.108 kb on + strand, within DvMF_2692 at 3406.125 kb on - strand, within DvMF_2692 at 3406.173 kb on - strand, within DvMF_2692 at 3406.178 kb on - strand, within DvMF_2692 at 3406.235 kb on + strand, within DvMF_2692 at 3406.353 kb on - strand at 3406.558 kb on + strand at 3406.799 kb on + strand, within DvMF_2693 at 3407.123 kb on - strand, within DvMF_2693 at 3407.173 kb on - strand, within DvMF_2693 at 3407.204 kb on - strand, within DvMF_2693
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,404,788 - DvMF_2691 0.36 +1.0 3,404,931 + DvMF_2691 0.46 +0.8 3,405,113 + DvMF_2691 0.58 -0.7 3,405,243 + DvMF_2691 0.66 +0.8 3,405,313 - DvMF_2691 0.71 +2.3 3,405,481 - DvMF_2691 0.82 -2.2 3,405,502 - DvMF_2691 0.84 +2.3 3,405,867 + DvMF_2692 0.21 -2.3 3,405,878 + DvMF_2692 0.23 -3.6 3,405,878 + DvMF_2692 0.23 -1.1 3,405,878 + DvMF_2692 0.23 -4.0 3,405,975 - DvMF_2692 0.39 -3.9 3,405,980 + DvMF_2692 0.40 -1.7 3,405,988 - DvMF_2692 0.41 -3.5 3,406,028 + DvMF_2692 0.48 -0.7 3,406,108 + DvMF_2692 0.62 -5.4 3,406,125 - DvMF_2692 0.64 -4.7 3,406,173 - DvMF_2692 0.73 -4.2 3,406,178 - DvMF_2692 0.73 -4.1 3,406,235 + DvMF_2692 0.83 -3.1 3,406,353 - +0.0 3,406,558 + -1.7 3,406,799 + DvMF_2693 0.16 -1.8 3,407,123 - DvMF_2693 0.35 -1.2 3,407,173 - DvMF_2693 0.37 -1.4 3,407,204 - DvMF_2693 0.39 -0.5
Or see this region's nucleotide sequence