Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2685 and DvMF_2686 are separated by 88 nucleotides DvMF_2686 and DvMF_2687 are separated by 238 nucleotides
DvMF_2685: DvMF_2685 - extracellular solute-binding protein family 3 (RefSeq), at 3,397,166 to 3,398,032
_2685
DvMF_2686: DvMF_2686 - polar amino acid ABC transporter, inner membrane subunit (RefSeq), at 3,398,121 to 3,399,071
_2686
DvMF_2687: DvMF_2687 - Polysulphide reductase NrfD (RefSeq), at 3,399,310 to 3,400,563
_2687
Position (kb)
3398
3399
3400 Strain fitness (log2 ratio)
-2
-1
0
1 at 3397.459 kb on + strand, within DvMF_2685 at 3397.571 kb on - strand, within DvMF_2685 at 3397.697 kb on + strand, within DvMF_2685 at 3397.710 kb on - strand, within DvMF_2685 at 3398.254 kb on - strand, within DvMF_2686 at 3398.284 kb on + strand, within DvMF_2686 at 3398.399 kb on + strand, within DvMF_2686 at 3398.407 kb on - strand, within DvMF_2686 at 3398.407 kb on - strand, within DvMF_2686 at 3398.429 kb on - strand, within DvMF_2686 at 3398.496 kb on + strand, within DvMF_2686 at 3398.689 kb on - strand, within DvMF_2686 at 3398.802 kb on + strand, within DvMF_2686 at 3398.831 kb on + strand, within DvMF_2686 at 3398.839 kb on - strand, within DvMF_2686 at 3399.033 kb on - strand at 3399.113 kb on + strand at 3399.144 kb on + strand at 3399.301 kb on - strand at 3399.311 kb on + strand at 3399.533 kb on + strand, within DvMF_2687 at 3399.936 kb on - strand, within DvMF_2687
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,397,459 + DvMF_2685 0.34 -1.5 3,397,571 - DvMF_2685 0.47 -0.1 3,397,697 + DvMF_2685 0.61 -0.3 3,397,710 - DvMF_2685 0.63 -1.0 3,398,254 - DvMF_2686 0.14 -0.3 3,398,284 + DvMF_2686 0.17 -2.4 3,398,399 + DvMF_2686 0.29 -0.2 3,398,407 - DvMF_2686 0.30 -0.4 3,398,407 - DvMF_2686 0.30 -0.6 3,398,429 - DvMF_2686 0.32 -0.9 3,398,496 + DvMF_2686 0.39 -0.6 3,398,689 - DvMF_2686 0.60 -0.3 3,398,802 + DvMF_2686 0.72 -2.2 3,398,831 + DvMF_2686 0.75 -1.6 3,398,839 - DvMF_2686 0.75 -0.6 3,399,033 - -0.3 3,399,113 + -0.6 3,399,144 + -0.2 3,399,301 - -0.9 3,399,311 + +0.6 3,399,533 + DvMF_2687 0.18 -0.2 3,399,936 - DvMF_2687 0.50 +0.3
Or see this region's nucleotide sequence