Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2587 and DvMF_2588 are separated by 77 nucleotides DvMF_2588 and DvMF_2589 are separated by 236 nucleotides DvMF_2589 and DvMF_2590 are separated by 595 nucleotides
DvMF_2587: DvMF_2587 - maf protein (RefSeq), at 3,272,312 to 3,272,962
_2587
DvMF_2588: DvMF_2588 - phosphatidylglycerophosphatase A (RefSeq), at 3,273,040 to 3,273,564
_2588
DvMF_2589: DvMF_2589 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 3,273,801 to 3,274,532
_2589
DvMF_2590: DvMF_2590 - response regulator receiver protein (RefSeq), at 3,275,128 to 3,275,523
_2590
Position (kb)
3273
3274
3275 Strain fitness (log2 ratio)
-1
0
1 at 3272.961 kb on + strand at 3272.961 kb on + strand at 3273.576 kb on - strand at 3273.610 kb on + strand at 3274.189 kb on - strand, within DvMF_2589 at 3274.282 kb on + strand, within DvMF_2589 at 3274.331 kb on + strand, within DvMF_2589 at 3274.415 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.441 kb on - strand, within DvMF_2589 at 3274.523 kb on - strand at 3274.603 kb on - strand at 3274.653 kb on - strand at 3274.754 kb on - strand at 3274.885 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.317 kb on - strand, within DvMF_2590
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,272,961 + -0.1 3,272,961 + -0.6 3,273,576 - -1.0 3,273,610 + -1.2 3,274,189 - DvMF_2589 0.53 -1.2 3,274,282 + DvMF_2589 0.66 -0.3 3,274,331 + DvMF_2589 0.72 -0.6 3,274,415 + DvMF_2589 0.84 -0.1 3,274,433 + DvMF_2589 0.86 -0.2 3,274,433 + DvMF_2589 0.86 +0.2 3,274,433 + DvMF_2589 0.86 +1.2 3,274,441 - DvMF_2589 0.87 -0.3 3,274,523 - -0.8 3,274,603 - -0.9 3,274,653 - -0.5 3,274,754 - -0.8 3,274,885 + -0.3 3,275,145 + +0.3 3,275,145 + -0.3 3,275,145 + +0.1 3,275,317 - DvMF_2590 0.48 +0.0
Or see this region's nucleotide sequence