Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2586 and DvMF_2587 are separated by 552 nucleotides DvMF_2587 and DvMF_2588 are separated by 77 nucleotides DvMF_2588 and DvMF_2589 are separated by 236 nucleotides
DvMF_2586: DvMF_2586 - hypothetical protein (RefSeq), at 3,271,343 to 3,271,759
_2586
DvMF_2587: DvMF_2587 - maf protein (RefSeq), at 3,272,312 to 3,272,962
_2587
DvMF_2588: DvMF_2588 - phosphatidylglycerophosphatase A (RefSeq), at 3,273,040 to 3,273,564
_2588
DvMF_2589: DvMF_2589 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 3,273,801 to 3,274,532
_2589
Position (kb)
3272
3273 Strain fitness (log2 ratio)
-1
0
1 at 3271.341 kb on + strand at 3271.864 kb on - strand at 3271.875 kb on - strand at 3272.162 kb on - strand at 3272.172 kb on - strand at 3272.206 kb on - strand at 3272.530 kb on + strand, within DvMF_2587 at 3272.597 kb on + strand, within DvMF_2587 at 3272.629 kb on + strand, within DvMF_2587 at 3272.778 kb on + strand, within DvMF_2587 at 3272.961 kb on + strand at 3272.961 kb on + strand at 3273.576 kb on - strand at 3273.610 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,271,341 + -0.9 3,271,864 - -0.9 3,271,875 - -1.2 3,272,162 - +0.1 3,272,172 - -1.1 3,272,206 - +0.0 3,272,530 + DvMF_2587 0.33 -0.2 3,272,597 + DvMF_2587 0.44 +0.3 3,272,629 + DvMF_2587 0.49 -0.1 3,272,778 + DvMF_2587 0.72 -0.1 3,272,961 + -0.1 3,272,961 + -0.6 3,273,576 - -1.0 3,273,610 + -1.2
Or see this region's nucleotide sequence