Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2567 and DvMF_2568 are separated by 97 nucleotides DvMF_2568 and DvMF_2569 are separated by 661 nucleotides
DvMF_2567: DvMF_2567 - phosphate ABC transporter, inner membrane subunit PstA (RefSeq), at 3,244,529 to 3,245,698
_2567
DvMF_2568: DvMF_2568 - filamentation induced by cAMP protein Fic (RefSeq), at 3,245,796 to 3,247,028
_2568
DvMF_2569: DvMF_2569 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 3,247,690 to 3,248,673
_2569
Position (kb)
3245
3246
3247
3248 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3244.834 kb on + strand, within DvMF_2567 at 3244.869 kb on + strand, within DvMF_2567 at 3244.909 kb on + strand, within DvMF_2567 at 3244.941 kb on - strand, within DvMF_2567 at 3244.970 kb on + strand, within DvMF_2567 at 3245.001 kb on + strand, within DvMF_2567 at 3245.268 kb on + strand, within DvMF_2567 at 3245.460 kb on - strand, within DvMF_2567 at 3245.653 kb on + strand at 3245.791 kb on + strand at 3245.855 kb on + strand at 3245.855 kb on + strand at 3245.878 kb on - strand at 3245.915 kb on - strand at 3245.977 kb on - strand, within DvMF_2568 at 3246.247 kb on + strand, within DvMF_2568 at 3246.516 kb on + strand, within DvMF_2568 at 3246.630 kb on - strand, within DvMF_2568 at 3246.716 kb on + strand, within DvMF_2568 at 3246.972 kb on + strand at 3246.991 kb on + strand at 3247.361 kb on + strand at 3247.708 kb on + strand at 3247.840 kb on + strand, within DvMF_2569 at 3247.959 kb on + strand, within DvMF_2569 at 3248.023 kb on + strand, within DvMF_2569
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,244,834 + DvMF_2567 0.26 -0.4 3,244,869 + DvMF_2567 0.29 -1.0 3,244,909 + DvMF_2567 0.32 -0.2 3,244,941 - DvMF_2567 0.35 -1.9 3,244,970 + DvMF_2567 0.38 -0.6 3,245,001 + DvMF_2567 0.40 -0.0 3,245,268 + DvMF_2567 0.63 -0.2 3,245,460 - DvMF_2567 0.80 -0.6 3,245,653 + -0.2 3,245,791 + -0.8 3,245,855 + -0.9 3,245,855 + +0.0 3,245,878 - -1.0 3,245,915 - -1.4 3,245,977 - DvMF_2568 0.15 -0.3 3,246,247 + DvMF_2568 0.37 +0.2 3,246,516 + DvMF_2568 0.58 +0.3 3,246,630 - DvMF_2568 0.68 -0.6 3,246,716 + DvMF_2568 0.75 -0.4 3,246,972 + -2.5 3,246,991 + -0.8 3,247,361 + -3.5 3,247,708 + -0.2 3,247,840 + DvMF_2569 0.15 -0.7 3,247,959 + DvMF_2569 0.27 +0.3 3,248,023 + DvMF_2569 0.34 -1.2
Or see this region's nucleotide sequence