Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2347 and DvMF_2348 are separated by 383 nucleotides DvMF_2348 and DvMF_2349 are separated by 32 nucleotides
DvMF_2347: DvMF_2347 - hypothetical protein (RefSeq), at 2,956,936 to 2,957,868
_2347
DvMF_2348: DvMF_2348 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,958,252 to 2,959,163
_2348
DvMF_2349: DvMF_2349 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,959,196 to 2,960,041
_2349
Position (kb)
2958
2959
2960 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2957.322 kb on + strand, within DvMF_2347 at 2957.470 kb on + strand, within DvMF_2347 at 2957.604 kb on - strand, within DvMF_2347 at 2957.715 kb on + strand, within DvMF_2347 at 2957.845 kb on + strand at 2957.900 kb on - strand at 2958.052 kb on + strand at 2958.113 kb on + strand at 2958.113 kb on - strand at 2958.241 kb on + strand at 2958.563 kb on - strand, within DvMF_2348 at 2958.596 kb on - strand, within DvMF_2348 at 2958.694 kb on - strand, within DvMF_2348 at 2958.731 kb on + strand, within DvMF_2348 at 2958.759 kb on + strand, within DvMF_2348 at 2958.767 kb on - strand, within DvMF_2348 at 2958.780 kb on + strand, within DvMF_2348 at 2958.897 kb on + strand, within DvMF_2348 at 2959.121 kb on - strand at 2959.430 kb on + strand, within DvMF_2349 at 2959.438 kb on - strand, within DvMF_2349 at 2959.478 kb on - strand, within DvMF_2349 at 2959.478 kb on - strand, within DvMF_2349 at 2959.531 kb on - strand, within DvMF_2349 at 2959.907 kb on - strand, within DvMF_2349 at 2960.012 kb on - strand at 2960.034 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,957,322 + DvMF_2347 0.41 -0.1 2,957,470 + DvMF_2347 0.57 -0.9 2,957,604 - DvMF_2347 0.72 -1.3 2,957,715 + DvMF_2347 0.83 -0.4 2,957,845 + -0.6 2,957,900 - +1.3 2,958,052 + -0.7 2,958,113 + -2.9 2,958,113 - -0.7 2,958,241 + -0.8 2,958,563 - DvMF_2348 0.34 +0.8 2,958,596 - DvMF_2348 0.38 -0.3 2,958,694 - DvMF_2348 0.48 -1.6 2,958,731 + DvMF_2348 0.53 -0.7 2,958,759 + DvMF_2348 0.56 +0.1 2,958,767 - DvMF_2348 0.56 -0.3 2,958,780 + DvMF_2348 0.58 +2.0 2,958,897 + DvMF_2348 0.71 -0.6 2,959,121 - -0.1 2,959,430 + DvMF_2349 0.28 -0.4 2,959,438 - DvMF_2349 0.29 +0.2 2,959,478 - DvMF_2349 0.33 -0.5 2,959,478 - DvMF_2349 0.33 -0.8 2,959,531 - DvMF_2349 0.40 -1.4 2,959,907 - DvMF_2349 0.84 -0.5 2,960,012 - -0.4 2,960,034 + -0.5
Or see this region's nucleotide sequence