Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2321 and DvMF_2322 are separated by 341 nucleotides DvMF_2322 and DvMF_2323 are separated by 498 nucleotides
DvMF_2321: DvMF_2321 - hypothetical protein (RefSeq), at 2,920,577 to 2,921,281
_2321
DvMF_2322: DvMF_2322 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq), at 2,921,623 to 2,924,337
_2322
DvMF_2323: DvMF_2323 - hypothetical protein (RefSeq), at 2,924,836 to 2,925,915
_2323
Position (kb)
2921
2922
2923
2924
2925 Strain fitness (log2 ratio)
-2
-1
0
1 at 2920.661 kb on - strand, within DvMF_2321 at 2920.833 kb on - strand, within DvMF_2321 at 2921.028 kb on + strand, within DvMF_2321 at 2921.094 kb on - strand, within DvMF_2321 at 2921.123 kb on + strand, within DvMF_2321 at 2921.290 kb on - strand at 2921.343 kb on + strand at 2921.543 kb on + strand at 2921.838 kb on + strand at 2921.914 kb on - strand, within DvMF_2322 at 2921.988 kb on + strand, within DvMF_2322 at 2922.127 kb on + strand, within DvMF_2322 at 2922.259 kb on + strand, within DvMF_2322 at 2922.417 kb on - strand, within DvMF_2322 at 2922.715 kb on - strand, within DvMF_2322 at 2923.030 kb on + strand, within DvMF_2322 at 2923.146 kb on + strand, within DvMF_2322 at 2923.241 kb on + strand, within DvMF_2322 at 2923.492 kb on - strand, within DvMF_2322 at 2923.676 kb on + strand, within DvMF_2322 at 2923.695 kb on - strand, within DvMF_2322 at 2923.741 kb on - strand, within DvMF_2322 at 2923.751 kb on - strand, within DvMF_2322 at 2924.012 kb on + strand, within DvMF_2322 at 2925.127 kb on - strand, within DvMF_2323 at 2925.255 kb on + strand, within DvMF_2323
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,920,661 - DvMF_2321 0.12 -1.1 2,920,833 - DvMF_2321 0.36 -0.9 2,921,028 + DvMF_2321 0.64 +0.1 2,921,094 - DvMF_2321 0.73 -0.5 2,921,123 + DvMF_2321 0.77 -2.3 2,921,290 - -0.3 2,921,343 + -0.2 2,921,543 + -0.5 2,921,838 + -0.1 2,921,914 - DvMF_2322 0.11 -0.7 2,921,988 + DvMF_2322 0.13 -0.5 2,922,127 + DvMF_2322 0.19 -0.8 2,922,259 + DvMF_2322 0.23 -0.4 2,922,417 - DvMF_2322 0.29 -0.3 2,922,715 - DvMF_2322 0.40 -0.6 2,923,030 + DvMF_2322 0.52 -1.2 2,923,146 + DvMF_2322 0.56 -0.6 2,923,241 + DvMF_2322 0.60 -1.6 2,923,492 - DvMF_2322 0.69 -0.3 2,923,676 + DvMF_2322 0.76 -1.4 2,923,695 - DvMF_2322 0.76 -0.5 2,923,741 - DvMF_2322 0.78 -0.8 2,923,751 - DvMF_2322 0.78 -0.6 2,924,012 + DvMF_2322 0.88 -1.0 2,925,127 - DvMF_2323 0.27 -0.9 2,925,255 + DvMF_2323 0.39 -1.1
Or see this region's nucleotide sequence