Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2312 and DvMF_2313 are separated by 366 nucleotides DvMF_2313 and DvMF_2314 are separated by 50 nucleotides DvMF_2314 and DvMF_2315 overlap by 4 nucleotides
DvMF_2312: DvMF_2312 - metallophosphoesterase (RefSeq), at 2,909,594 to 2,911,135
_2312
DvMF_2313: DvMF_2313 - DNA-directed DNA polymerase (RefSeq), at 2,911,502 to 2,912,947
_2313
DvMF_2314: DvMF_2314 - aminotransferase class IV (RefSeq), at 2,912,998 to 2,913,771
_2314
DvMF_2315: DvMF_2315 - Chorismate binding-like protein (RefSeq), at 2,913,768 to 2,915,411
_2315
Position (kb)
2911
2912
2913 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2910.508 kb on - strand, within DvMF_2312 at 2910.575 kb on + strand, within DvMF_2312 at 2910.630 kb on + strand, within DvMF_2312 at 2910.638 kb on - strand, within DvMF_2312 at 2910.910 kb on + strand, within DvMF_2312 at 2910.924 kb on - strand, within DvMF_2312 at 2910.945 kb on - strand, within DvMF_2312 at 2911.344 kb on + strand at 2911.523 kb on - strand at 2911.680 kb on + strand, within DvMF_2313 at 2911.859 kb on - strand, within DvMF_2313 at 2911.869 kb on - strand, within DvMF_2313 at 2911.996 kb on + strand, within DvMF_2313 at 2912.046 kb on + strand, within DvMF_2313 at 2912.111 kb on + strand, within DvMF_2313 at 2912.179 kb on + strand, within DvMF_2313 at 2912.240 kb on + strand, within DvMF_2313 at 2912.394 kb on + strand, within DvMF_2313 at 2912.400 kb on + strand, within DvMF_2313 at 2912.510 kb on - strand, within DvMF_2313 at 2912.980 kb on + strand at 2913.192 kb on - strand, within DvMF_2314 at 2913.194 kb on + strand, within DvMF_2314 at 2913.796 kb on + strand at 2913.796 kb on + strand at 2913.845 kb on - strand at 2913.899 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,910,508 - DvMF_2312 0.59 -0.5 2,910,575 + DvMF_2312 0.64 -0.6 2,910,630 + DvMF_2312 0.67 -1.3 2,910,638 - DvMF_2312 0.68 -0.7 2,910,910 + DvMF_2312 0.85 -0.7 2,910,924 - DvMF_2312 0.86 -0.4 2,910,945 - DvMF_2312 0.88 -0.4 2,911,344 + -2.3 2,911,523 - -0.7 2,911,680 + DvMF_2313 0.12 -0.5 2,911,859 - DvMF_2313 0.25 -0.5 2,911,869 - DvMF_2313 0.25 -0.4 2,911,996 + DvMF_2313 0.34 -0.2 2,912,046 + DvMF_2313 0.38 -1.3 2,912,111 + DvMF_2313 0.42 -0.8 2,912,179 + DvMF_2313 0.47 +0.8 2,912,240 + DvMF_2313 0.51 -0.7 2,912,394 + DvMF_2313 0.62 -0.1 2,912,400 + DvMF_2313 0.62 -0.7 2,912,510 - DvMF_2313 0.70 +1.1 2,912,980 + -0.1 2,913,192 - DvMF_2314 0.25 +2.1 2,913,194 + DvMF_2314 0.25 -0.3 2,913,796 + -0.0 2,913,796 + -1.2 2,913,845 - -0.5 2,913,899 - -1.0
Or see this region's nucleotide sequence