Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2233 and DvMF_2234 are separated by 348 nucleotides DvMF_2234 and DvMF_2235 are separated by 227 nucleotides
DvMF_2233: DvMF_2233 - carbon-monoxide dehydrogenase, catalytic subunit (RefSeq), at 2,794,183 to 2,796,072
_2233
DvMF_2234: DvMF_2234 - transcriptional regulator, Crp/Fnr family (RefSeq), at 2,796,421 to 2,797,263
_2234
DvMF_2235: DvMF_2235 - translation initiation factor, aIF-2BI family (RefSeq), at 2,797,491 to 2,798,543
_2235
Position (kb)
2796
2797
2798 Strain fitness (log2 ratio)
-2
-1
0
1 at 2795.461 kb on + strand, within DvMF_2233 at 2795.514 kb on + strand, within DvMF_2233 at 2795.520 kb on + strand, within DvMF_2233 at 2795.538 kb on - strand, within DvMF_2233 at 2795.580 kb on - strand, within DvMF_2233 at 2795.635 kb on + strand, within DvMF_2233 at 2795.718 kb on + strand, within DvMF_2233 at 2795.732 kb on - strand, within DvMF_2233 at 2795.771 kb on - strand, within DvMF_2233 at 2795.982 kb on - strand at 2796.433 kb on - strand at 2796.630 kb on - strand, within DvMF_2234 at 2796.845 kb on + strand, within DvMF_2234 at 2796.947 kb on + strand, within DvMF_2234 at 2797.436 kb on + strand at 2797.493 kb on + strand at 2797.726 kb on + strand, within DvMF_2235 at 2797.899 kb on + strand, within DvMF_2235 at 2797.939 kb on - strand, within DvMF_2235 at 2798.079 kb on + strand, within DvMF_2235 at 2798.103 kb on + strand, within DvMF_2235 at 2798.231 kb on - strand, within DvMF_2235 at 2798.244 kb on + strand, within DvMF_2235 at 2798.252 kb on - strand, within DvMF_2235 at 2798.259 kb on - strand, within DvMF_2235
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,795,461 + DvMF_2233 0.68 -0.3 2,795,514 + DvMF_2233 0.70 -0.9 2,795,520 + DvMF_2233 0.71 -2.2 2,795,538 - DvMF_2233 0.72 -0.3 2,795,580 - DvMF_2233 0.74 -0.8 2,795,635 + DvMF_2233 0.77 -1.1 2,795,718 + DvMF_2233 0.81 -0.7 2,795,732 - DvMF_2233 0.82 -0.4 2,795,771 - DvMF_2233 0.84 -0.1 2,795,982 - -0.8 2,796,433 - -0.3 2,796,630 - DvMF_2234 0.25 -0.5 2,796,845 + DvMF_2234 0.50 -1.2 2,796,947 + DvMF_2234 0.62 -0.9 2,797,436 + -0.7 2,797,493 + -0.3 2,797,726 + DvMF_2235 0.22 -2.3 2,797,899 + DvMF_2235 0.39 -0.7 2,797,939 - DvMF_2235 0.43 +0.7 2,798,079 + DvMF_2235 0.56 -0.4 2,798,103 + DvMF_2235 0.58 -0.8 2,798,231 - DvMF_2235 0.70 -0.0 2,798,244 + DvMF_2235 0.72 +0.1 2,798,252 - DvMF_2235 0.72 -1.2 2,798,259 - DvMF_2235 0.73 -0.4
Or see this region's nucleotide sequence