Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2192 and DvMF_2193 are separated by 97 nucleotides DvMF_2193 and DvMF_2194 are separated by 876 nucleotides
DvMF_2192: DvMF_2192 - protein of unknown function DUF81 (RefSeq), at 2,737,714 to 2,738,856
_2192
DvMF_2193: DvMF_2193 - protein of unknown function DUF169 (RefSeq), at 2,738,954 to 2,739,730
_2193
DvMF_2194: DvMF_2194 - permease (RefSeq), at 2,740,607 to 2,741,704
_2194
Position (kb)
2738
2739
2740 Strain fitness (log2 ratio)
-2
-1
0
1 at 2738.096 kb on - strand, within DvMF_2192 at 2738.142 kb on + strand, within DvMF_2192 at 2738.289 kb on + strand, within DvMF_2192 at 2738.316 kb on + strand, within DvMF_2192 at 2738.524 kb on + strand, within DvMF_2192 at 2738.656 kb on + strand, within DvMF_2192 at 2738.675 kb on - strand, within DvMF_2192 at 2738.680 kb on - strand, within DvMF_2192 at 2738.856 kb on + strand at 2739.135 kb on - strand, within DvMF_2193 at 2739.254 kb on - strand, within DvMF_2193 at 2739.369 kb on + strand, within DvMF_2193 at 2739.377 kb on - strand, within DvMF_2193 at 2739.421 kb on + strand, within DvMF_2193 at 2739.509 kb on + strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.537 kb on + strand, within DvMF_2193 at 2739.579 kb on - strand, within DvMF_2193 at 2739.587 kb on - strand, within DvMF_2193 at 2739.606 kb on - strand, within DvMF_2193 at 2739.738 kb on + strand at 2739.898 kb on + strand at 2739.898 kb on + strand at 2739.906 kb on - strand at 2739.906 kb on - strand at 2740.391 kb on - strand at 2740.426 kb on - strand at 2740.477 kb on - strand at 2740.610 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,738,096 - DvMF_2192 0.33 -0.8 2,738,142 + DvMF_2192 0.37 -0.7 2,738,289 + DvMF_2192 0.50 -0.3 2,738,316 + DvMF_2192 0.53 -1.1 2,738,524 + DvMF_2192 0.71 -0.9 2,738,656 + DvMF_2192 0.82 -0.9 2,738,675 - DvMF_2192 0.84 -0.0 2,738,680 - DvMF_2192 0.85 -0.8 2,738,856 + -0.2 2,739,135 - DvMF_2193 0.23 +0.1 2,739,254 - DvMF_2193 0.39 +0.1 2,739,369 + DvMF_2193 0.53 -0.1 2,739,377 - DvMF_2193 0.54 -0.3 2,739,421 + DvMF_2193 0.60 -0.0 2,739,509 + DvMF_2193 0.71 -1.1 2,739,517 - DvMF_2193 0.72 -0.2 2,739,517 - DvMF_2193 0.72 -0.2 2,739,537 + DvMF_2193 0.75 -0.3 2,739,579 - DvMF_2193 0.80 -0.2 2,739,587 - DvMF_2193 0.81 -0.5 2,739,606 - DvMF_2193 0.84 -0.6 2,739,738 + -0.5 2,739,898 + -0.5 2,739,898 + +0.1 2,739,906 - -0.7 2,739,906 - -1.1 2,740,391 - +0.9 2,740,426 - -0.8 2,740,477 - -2.2 2,740,610 + -0.8
Or see this region's nucleotide sequence