Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2027 and DvMF_2028 are separated by 228 nucleotides DvMF_2028 and DvMF_2029 are separated by 302 nucleotides DvMF_2029 and DvMF_2030 are separated by 265 nucleotides
DvMF_2027: DvMF_2027 - inositol monophosphatase (RefSeq), at 2,512,017 to 2,512,979
_2027
DvMF_2028: DvMF_2028 - NLP/P60 protein (RefSeq), at 2,513,208 to 2,513,909
_2028
DvMF_2029: DvMF_2029 - histone family protein DNA-binding protein (RefSeq), at 2,514,212 to 2,514,499
_2029
DvMF_2030: DvMF_2030 - MerR family transcriptional regulator (RefSeq), at 2,514,765 to 2,515,484
_2030
Position (kb)
2513
2514 Strain fitness (log2 ratio)
-2
-1
0
1 at 2512.438 kb on + strand, within DvMF_2027 at 2512.565 kb on + strand, within DvMF_2027 at 2512.741 kb on - strand, within DvMF_2027 at 2512.896 kb on + strand at 2512.950 kb on + strand at 2512.950 kb on - strand at 2512.952 kb on + strand at 2513.160 kb on - strand at 2513.247 kb on + strand at 2513.337 kb on + strand, within DvMF_2028 at 2513.405 kb on - strand, within DvMF_2028 at 2513.552 kb on + strand, within DvMF_2028 at 2513.580 kb on + strand, within DvMF_2028 at 2513.590 kb on + strand, within DvMF_2028 at 2513.634 kb on - strand, within DvMF_2028 at 2513.699 kb on - strand, within DvMF_2028 at 2513.747 kb on + strand, within DvMF_2028 at 2513.755 kb on - strand, within DvMF_2028 at 2513.788 kb on + strand, within DvMF_2028 at 2513.903 kb on + strand at 2514.048 kb on - strand at 2514.050 kb on + strand at 2514.187 kb on - strand at 2514.558 kb on + strand at 2514.697 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,512,438 + DvMF_2027 0.44 -2.2 2,512,565 + DvMF_2027 0.57 -0.2 2,512,741 - DvMF_2027 0.75 -0.9 2,512,896 + -0.1 2,512,950 + -0.2 2,512,950 - +1.0 2,512,952 + +0.8 2,513,160 - -1.0 2,513,247 + -0.4 2,513,337 + DvMF_2028 0.18 -2.5 2,513,405 - DvMF_2028 0.28 -1.4 2,513,552 + DvMF_2028 0.49 -0.8 2,513,580 + DvMF_2028 0.53 -0.7 2,513,590 + DvMF_2028 0.54 -0.4 2,513,634 - DvMF_2028 0.61 -0.7 2,513,699 - DvMF_2028 0.70 -1.9 2,513,747 + DvMF_2028 0.77 -0.4 2,513,755 - DvMF_2028 0.78 -1.1 2,513,788 + DvMF_2028 0.83 -0.7 2,513,903 + -0.5 2,514,048 - -0.4 2,514,050 + -1.1 2,514,187 - -0.8 2,514,558 + -0.4 2,514,697 + -0.5
Or see this region's nucleotide sequence