Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1842 and DvMF_1843 are separated by 187 nucleotides DvMF_1843 and DvMF_1844 are separated by 177 nucleotides DvMF_1844 and DvMF_1845 overlap by 16 nucleotides
DvMF_1842: DvMF_1842 - glycosyl transferase family 2 (RefSeq), at 2,252,273 to 2,254,927
_1842
DvMF_1843: DvMF_1843 - acetyltransferase (RefSeq), at 2,255,115 to 2,255,783
_1843
DvMF_1844: DvMF_1844 - acylneuraminate cytidylyltransferase (RefSeq), at 2,255,961 to 2,256,725
_1844
DvMF_1845: DvMF_1845 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,256,710 to 2,257,744
_1845
Position (kb)
2255
2256 Strain fitness (log2 ratio)
-1
0
1
2 at 2254.139 kb on - strand, within DvMF_1842 at 2254.280 kb on + strand, within DvMF_1842 at 2254.403 kb on + strand, within DvMF_1842 at 2254.503 kb on - strand, within DvMF_1842 at 2254.665 kb on - strand at 2254.667 kb on - strand at 2254.837 kb on - strand at 2254.877 kb on + strand at 2255.091 kb on + strand at 2255.121 kb on + strand at 2255.126 kb on - strand at 2255.184 kb on + strand, within DvMF_1843 at 2255.497 kb on + strand, within DvMF_1843 at 2255.546 kb on - strand, within DvMF_1843 at 2255.631 kb on + strand, within DvMF_1843 at 2255.703 kb on - strand, within DvMF_1843 at 2256.017 kb on - strand at 2256.125 kb on + strand, within DvMF_1844 at 2256.130 kb on + strand, within DvMF_1844 at 2256.142 kb on + strand, within DvMF_1844
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,254,139 - DvMF_1842 0.70 -0.3 2,254,280 + DvMF_1842 0.76 -0.9 2,254,403 + DvMF_1842 0.80 -0.5 2,254,503 - DvMF_1842 0.84 -0.9 2,254,665 - -0.5 2,254,667 - -1.3 2,254,837 - +0.2 2,254,877 + -1.2 2,255,091 + -0.1 2,255,121 + -1.0 2,255,126 - +0.3 2,255,184 + DvMF_1843 0.10 -1.3 2,255,497 + DvMF_1843 0.57 -0.7 2,255,546 - DvMF_1843 0.64 -1.0 2,255,631 + DvMF_1843 0.77 -0.8 2,255,703 - DvMF_1843 0.88 -0.4 2,256,017 - -0.7 2,256,125 + DvMF_1844 0.21 +2.1 2,256,130 + DvMF_1844 0.22 -1.5 2,256,142 + DvMF_1844 0.24 -0.2
Or see this region's nucleotide sequence