Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1824 and DvMF_1825 are separated by 72 nucleotides DvMF_1825 and DvMF_1826 are separated by 13 nucleotides
DvMF_1824: DvMF_1824 - metal dependent phosphohydrolase (RefSeq), at 2,226,081 to 2,227,391
_1824
DvMF_1825: DvMF_1825 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 2,227,464 to 2,228,483
_1825
DvMF_1826: DvMF_1826 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 2,228,497 to 2,229,498
_1826
Position (kb)
2227
2228
2229 Strain fitness (log2 ratio)
-1
0
1 at 2226.570 kb on + strand, within DvMF_1824 at 2226.644 kb on - strand, within DvMF_1824 at 2226.668 kb on - strand, within DvMF_1824 at 2227.009 kb on + strand, within DvMF_1824 at 2227.340 kb on - strand at 2227.462 kb on + strand at 2227.525 kb on + strand at 2227.804 kb on - strand, within DvMF_1825 at 2227.931 kb on - strand, within DvMF_1825 at 2228.068 kb on + strand, within DvMF_1825 at 2228.111 kb on + strand, within DvMF_1825 at 2228.250 kb on - strand, within DvMF_1825 at 2228.280 kb on - strand, within DvMF_1825 at 2228.864 kb on - strand, within DvMF_1826 at 2228.891 kb on + strand, within DvMF_1826 at 2228.994 kb on - strand, within DvMF_1826 at 2229.176 kb on - strand, within DvMF_1826 at 2229.273 kb on + strand, within DvMF_1826 at 2229.385 kb on + strand, within DvMF_1826 at 2229.406 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,226,570 + DvMF_1824 0.37 +0.6 2,226,644 - DvMF_1824 0.43 -0.6 2,226,668 - DvMF_1824 0.45 -0.8 2,227,009 + DvMF_1824 0.71 -0.4 2,227,340 - -0.0 2,227,462 + -0.6 2,227,525 + -0.5 2,227,804 - DvMF_1825 0.33 -0.6 2,227,931 - DvMF_1825 0.46 +0.9 2,228,068 + DvMF_1825 0.59 +0.2 2,228,111 + DvMF_1825 0.63 +0.1 2,228,250 - DvMF_1825 0.77 +0.7 2,228,280 - DvMF_1825 0.80 +0.4 2,228,864 - DvMF_1826 0.37 +0.0 2,228,891 + DvMF_1826 0.39 +0.5 2,228,994 - DvMF_1826 0.50 -0.1 2,229,176 - DvMF_1826 0.68 +0.4 2,229,273 + DvMF_1826 0.77 +0.3 2,229,385 + DvMF_1826 0.89 +0.5 2,229,406 - +0.3
Or see this region's nucleotide sequence