Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1774 and DvMF_1775 are separated by 475 nucleotides DvMF_1775 and DvMF_1776 are separated by 415 nucleotides
DvMF_1774: DvMF_1774 - hypothetical protein (RefSeq), at 2,169,795 to 2,170,553
_1774
DvMF_1775: DvMF_1775 - acetate/CoA ligase (RefSeq), at 2,171,029 to 2,173,032
_1775
DvMF_1776: DvMF_1776 - GCN5-related N-acetyltransferase (RefSeq), at 2,173,448 to 2,176,144
_1776
Position (kb)
2171
2172
2173
2174 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2170.047 kb on + strand, within DvMF_1774 at 2170.618 kb on - strand at 2171.091 kb on + strand at 2171.091 kb on + strand at 2171.253 kb on - strand, within DvMF_1775 at 2171.274 kb on + strand, within DvMF_1775 at 2171.524 kb on + strand, within DvMF_1775 at 2171.528 kb on + strand, within DvMF_1775 at 2171.536 kb on - strand, within DvMF_1775 at 2171.592 kb on + strand, within DvMF_1775 at 2171.820 kb on - strand, within DvMF_1775 at 2171.998 kb on + strand, within DvMF_1775 at 2172.036 kb on + strand, within DvMF_1775 at 2172.087 kb on - strand, within DvMF_1775 at 2172.102 kb on + strand, within DvMF_1775 at 2172.175 kb on - strand, within DvMF_1775 at 2172.245 kb on + strand, within DvMF_1775 at 2172.571 kb on + strand, within DvMF_1775 at 2172.579 kb on - strand, within DvMF_1775 at 2172.781 kb on - strand, within DvMF_1775 at 2172.795 kb on + strand, within DvMF_1775 at 2172.916 kb on - strand at 2173.125 kb on - strand at 2173.156 kb on + strand at 2173.327 kb on + strand at 2173.429 kb on + strand at 2173.558 kb on + strand at 2173.605 kb on + strand at 2173.830 kb on - strand, within DvMF_1776 at 2173.969 kb on + strand, within DvMF_1776 at 2173.969 kb on + strand, within DvMF_1776
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,170,047 + DvMF_1774 0.33 -0.6 2,170,618 - -0.5 2,171,091 + -3.6 2,171,091 + -2.1 2,171,253 - DvMF_1775 0.11 -1.7 2,171,274 + DvMF_1775 0.12 -4.1 2,171,524 + DvMF_1775 0.25 -3.3 2,171,528 + DvMF_1775 0.25 -1.8 2,171,536 - DvMF_1775 0.25 -3.7 2,171,592 + DvMF_1775 0.28 -4.5 2,171,820 - DvMF_1775 0.39 -3.7 2,171,998 + DvMF_1775 0.48 -3.5 2,172,036 + DvMF_1775 0.50 -3.4 2,172,087 - DvMF_1775 0.53 -2.6 2,172,102 + DvMF_1775 0.54 -3.8 2,172,175 - DvMF_1775 0.57 -1.6 2,172,245 + DvMF_1775 0.61 -2.1 2,172,571 + DvMF_1775 0.77 -2.3 2,172,579 - DvMF_1775 0.77 -3.4 2,172,781 - DvMF_1775 0.87 -3.4 2,172,795 + DvMF_1775 0.88 -3.4 2,172,916 - -5.5 2,173,125 - -1.1 2,173,156 + -1.0 2,173,327 + -1.5 2,173,429 + -0.5 2,173,558 + -1.4 2,173,605 + -1.5 2,173,830 - DvMF_1776 0.14 -1.9 2,173,969 + DvMF_1776 0.19 -1.5 2,173,969 + DvMF_1776 0.19 -1.4
Or see this region's nucleotide sequence