Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1770 and DvMF_1771 are separated by 125 nucleotides DvMF_1771 and DvMF_1772 are separated by 86 nucleotides DvMF_1772 and DvMF_1773 are separated by 99 nucleotides
DvMF_1770: DvMF_1770 - hypothetical protein (RefSeq), at 2,166,664 to 2,167,398
_1770
DvMF_1771: DvMF_1771 - hypothetical protein (RefSeq), at 2,167,524 to 2,167,814
_1771
DvMF_1772: DvMF_1772 - response regulator receiver protein (RefSeq), at 2,167,901 to 2,168,356
_1772
DvMF_1773: DvMF_1773 - response regulator receiver sensor signal transduction histidine kinase (RefSeq), at 2,168,456 to 2,169,682
_1773
Position (kb)
2167
2168
2169 Strain fitness (log2 ratio)
-1
0
1 at 2167.061 kb on + strand, within DvMF_1770 at 2167.063 kb on - strand, within DvMF_1770 at 2167.900 kb on + strand at 2168.096 kb on + strand, within DvMF_1772 at 2168.237 kb on - strand, within DvMF_1772 at 2168.303 kb on - strand, within DvMF_1772 at 2169.026 kb on + strand, within DvMF_1773 at 2169.080 kb on + strand, within DvMF_1773 at 2169.140 kb on - strand, within DvMF_1773
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,167,061 + DvMF_1770 0.54 -1.4 2,167,063 - DvMF_1770 0.54 +0.3 2,167,900 + -0.2 2,168,096 + DvMF_1772 0.43 +0.2 2,168,237 - DvMF_1772 0.74 -0.0 2,168,303 - DvMF_1772 0.88 +0.2 2,169,026 + DvMF_1773 0.46 -0.8 2,169,080 + DvMF_1773 0.51 -0.3 2,169,140 - DvMF_1773 0.56 -0.3
Or see this region's nucleotide sequence