Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1744 and DvMF_1745 are separated by 195 nucleotides DvMF_1745 and DvMF_1746 overlap by 20 nucleotides DvMF_1746 and DvMF_1747 are separated by 120 nucleotides DvMF_1747 and DvMF_1748 overlap by 4 nucleotides
DvMF_1744: DvMF_1744 - anthranilate phosphoribosyltransferase (RefSeq), at 2,131,190 to 2,132,206
_1744
DvMF_1745: DvMF_1745 - glutamine amidotransferase of anthranilate synthase (RefSeq), at 2,132,402 to 2,132,980
_1745
DvMF_1746: DvMF_1746 - Anthranilate synthase (RefSeq), at 2,132,961 to 2,134,523
_1746
DvMF_1747: DvMF_1747 - Prephenate dehydrogenase (RefSeq), at 2,134,644 to 2,135,435
_1747
DvMF_1748: DvMF_1748 - 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq), at 2,135,432 to 2,136,784
_1748
Position (kb)
2132
2133
2134
2135 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2132.406 kb on - strand at 2132.406 kb on - strand at 2132.472 kb on + strand, within DvMF_1745 at 2132.505 kb on + strand, within DvMF_1745 at 2132.505 kb on + strand, within DvMF_1745 at 2132.513 kb on - strand, within DvMF_1745 at 2132.513 kb on - strand, within DvMF_1745 at 2132.697 kb on - strand, within DvMF_1745 at 2132.740 kb on + strand, within DvMF_1745 at 2132.746 kb on + strand, within DvMF_1745 at 2132.754 kb on - strand, within DvMF_1745 at 2132.821 kb on + strand, within DvMF_1745 at 2133.156 kb on + strand, within DvMF_1746 at 2133.198 kb on + strand, within DvMF_1746 at 2133.386 kb on + strand, within DvMF_1746 at 2133.544 kb on - strand, within DvMF_1746 at 2133.727 kb on - strand, within DvMF_1746 at 2133.774 kb on + strand, within DvMF_1746 at 2133.788 kb on + strand, within DvMF_1746 at 2133.851 kb on + strand, within DvMF_1746 at 2133.859 kb on - strand, within DvMF_1746 at 2133.938 kb on + strand, within DvMF_1746 at 2133.948 kb on + strand, within DvMF_1746 at 2133.988 kb on + strand, within DvMF_1746 at 2134.006 kb on - strand, within DvMF_1746 at 2134.132 kb on + strand, within DvMF_1746 at 2134.333 kb on - strand, within DvMF_1746 at 2134.348 kb on + strand, within DvMF_1746
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,132,406 - -1.0 2,132,406 - -1.3 2,132,472 + DvMF_1745 0.12 -1.6 2,132,505 + DvMF_1745 0.18 -1.2 2,132,505 + DvMF_1745 0.18 -1.2 2,132,513 - DvMF_1745 0.19 -1.9 2,132,513 - DvMF_1745 0.19 -1.8 2,132,697 - DvMF_1745 0.51 -1.6 2,132,740 + DvMF_1745 0.58 -1.4 2,132,746 + DvMF_1745 0.59 +1.3 2,132,754 - DvMF_1745 0.61 -1.6 2,132,821 + DvMF_1745 0.72 -3.7 2,133,156 + DvMF_1746 0.12 -2.6 2,133,198 + DvMF_1746 0.15 -2.2 2,133,386 + DvMF_1746 0.27 -3.1 2,133,544 - DvMF_1746 0.37 -5.1 2,133,727 - DvMF_1746 0.49 -2.3 2,133,774 + DvMF_1746 0.52 -2.1 2,133,788 + DvMF_1746 0.53 -4.5 2,133,851 + DvMF_1746 0.57 -2.1 2,133,859 - DvMF_1746 0.57 -3.0 2,133,938 + DvMF_1746 0.63 -3.4 2,133,948 + DvMF_1746 0.63 -3.7 2,133,988 + DvMF_1746 0.66 -3.3 2,134,006 - DvMF_1746 0.67 -1.4 2,134,132 + DvMF_1746 0.75 -2.5 2,134,333 - DvMF_1746 0.88 -2.2 2,134,348 + DvMF_1746 0.89 -2.9
Or see this region's nucleotide sequence