Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1696 and DvMF_1697 are separated by 463 nucleotides DvMF_1697 and DvMF_1698 are separated by 303 nucleotides
DvMF_1696: DvMF_1696 - Phosphoglycerate mutase (RefSeq), at 2,066,887 to 2,068,095
_1696
DvMF_1697: DvMF_1697 - hypothetical protein (RefSeq), at 2,068,559 to 2,068,888
_1697
DvMF_1698: DvMF_1698 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,069,192 to 2,072,083
_1698
Position (kb)
2068
2069 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2067.611 kb on - strand, within DvMF_1696 at 2067.856 kb on - strand, within DvMF_1696 at 2067.980 kb on + strand at 2068.049 kb on - strand at 2068.154 kb on + strand at 2068.219 kb on + strand at 2068.220 kb on + strand at 2068.220 kb on + strand at 2068.238 kb on - strand at 2068.240 kb on + strand at 2068.240 kb on + strand at 2068.248 kb on - strand at 2068.412 kb on - strand at 2068.492 kb on + strand at 2068.674 kb on + strand, within DvMF_1697 at 2068.674 kb on + strand, within DvMF_1697 at 2068.801 kb on - strand, within DvMF_1697 at 2068.834 kb on + strand, within DvMF_1697 at 2068.849 kb on - strand, within DvMF_1697 at 2069.092 kb on + strand at 2069.254 kb on + strand at 2069.262 kb on - strand at 2069.444 kb on - strand at 2069.508 kb on + strand, within DvMF_1698 at 2069.632 kb on - strand, within DvMF_1698 at 2069.757 kb on - strand, within DvMF_1698 at 2069.810 kb on + strand, within DvMF_1698 at 2069.818 kb on - strand, within DvMF_1698
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,067,611 - DvMF_1696 0.60 +0.1 2,067,856 - DvMF_1696 0.80 -0.3 2,067,980 + -0.4 2,068,049 - -1.7 2,068,154 + -0.6 2,068,219 + -0.2 2,068,220 + -0.6 2,068,220 + -0.7 2,068,238 - -0.2 2,068,240 + -1.0 2,068,240 + -0.7 2,068,248 - -0.3 2,068,412 - -0.5 2,068,492 + -0.0 2,068,674 + DvMF_1697 0.35 +3.3 2,068,674 + DvMF_1697 0.35 -0.8 2,068,801 - DvMF_1697 0.73 -0.8 2,068,834 + DvMF_1697 0.83 -1.1 2,068,849 - DvMF_1697 0.88 +0.3 2,069,092 + -0.5 2,069,254 + -0.4 2,069,262 - -0.5 2,069,444 - -1.3 2,069,508 + DvMF_1698 0.11 -0.1 2,069,632 - DvMF_1698 0.15 -1.3 2,069,757 - DvMF_1698 0.20 -0.5 2,069,810 + DvMF_1698 0.21 -0.9 2,069,818 - DvMF_1698 0.22 -1.3
Or see this region's nucleotide sequence