Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1326 and DvMF_1327 are separated by 362 nucleotides DvMF_1327 and DvMF_1328 are separated by 145 nucleotides DvMF_1328 and DvMF_1329 are separated by 290 nucleotides
DvMF_1326: DvMF_1326 - protein of unknown function DUF52 (RefSeq), at 1,621,300 to 1,622,148
_1326
DvMF_1327: DvMF_1327 - hypothetical protein (RefSeq), at 1,622,511 to 1,623,554
_1327
DvMF_1328: DvMF_1328 - heavy metal-binding domain-containing protein (RefSeq), at 1,623,700 to 1,623,909
_1328
DvMF_1329: DvMF_1329 - hypothetical protein (RefSeq), at 1,624,200 to 1,624,493
_1329
Position (kb)
1622
1623
1624 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1621.539 kb on + strand, within DvMF_1326 at 1621.547 kb on - strand, within DvMF_1326 at 1621.706 kb on + strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.714 kb on - strand, within DvMF_1326 at 1621.750 kb on - strand, within DvMF_1326 at 1621.785 kb on + strand, within DvMF_1326 at 1621.835 kb on + strand, within DvMF_1326 at 1621.958 kb on - strand, within DvMF_1326 at 1622.028 kb on + strand, within DvMF_1326 at 1622.222 kb on - strand at 1622.288 kb on + strand at 1622.363 kb on - strand at 1623.040 kb on + strand, within DvMF_1327 at 1623.291 kb on + strand, within DvMF_1327 at 1623.326 kb on - strand, within DvMF_1327 at 1623.477 kb on - strand at 1623.744 kb on - strand, within DvMF_1328 at 1623.887 kb on + strand, within DvMF_1328 at 1624.094 kb on - strand at 1624.126 kb on + strand at 1624.250 kb on - strand, within DvMF_1329 at 1624.349 kb on + strand, within DvMF_1329 at 1624.414 kb on - strand, within DvMF_1329 at 1624.450 kb on - strand, within DvMF_1329 at 1624.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,621,539 + DvMF_1326 0.28 -0.8 1,621,547 - DvMF_1326 0.29 -0.7 1,621,706 + DvMF_1326 0.48 -0.9 1,621,714 - DvMF_1326 0.49 -3.5 1,621,714 - DvMF_1326 0.49 -0.3 1,621,714 - DvMF_1326 0.49 +0.8 1,621,750 - DvMF_1326 0.53 +0.4 1,621,785 + DvMF_1326 0.57 -0.9 1,621,835 + DvMF_1326 0.63 -1.3 1,621,958 - DvMF_1326 0.78 -1.4 1,622,028 + DvMF_1326 0.86 -0.6 1,622,222 - -0.2 1,622,288 + -0.9 1,622,363 - -0.2 1,623,040 + DvMF_1327 0.51 -0.5 1,623,291 + DvMF_1327 0.75 -0.5 1,623,326 - DvMF_1327 0.78 -0.3 1,623,477 - +0.1 1,623,744 - DvMF_1328 0.21 -1.6 1,623,887 + DvMF_1328 0.89 -1.6 1,624,094 - -0.6 1,624,126 + -0.7 1,624,250 - DvMF_1329 0.17 +0.7 1,624,349 + DvMF_1329 0.51 -0.4 1,624,414 - DvMF_1329 0.73 -0.6 1,624,450 - DvMF_1329 0.85 -1.1 1,624,512 + -0.5
Or see this region's nucleotide sequence