Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1298 and DvMF_1299 overlap by 4 nucleotides DvMF_1299 and DvMF_1300 overlap by 1 nucleotides DvMF_1300 and DvMF_1301 overlap by 14 nucleotides
DvMF_1298: DvMF_1298 - phage tail tape measure protein, TP901 family (RefSeq), at 1,587,062 to 1,589,407
_1298
DvMF_1299: DvMF_1299 - hypothetical protein (RefSeq), at 1,589,404 to 1,589,949
_1299
DvMF_1300: DvMF_1300 - hypothetical protein (RefSeq), at 1,589,949 to 1,590,749
_1300
DvMF_1301: DvMF_1301 - baseplate assembly protein, putative (RefSeq), at 1,590,736 to 1,591,461
_1301
Position (kb)
1589
1590
1591 Strain fitness (log2 ratio)
-1
0
1 at 1589.009 kb on - strand, within DvMF_1298 at 1589.131 kb on - strand, within DvMF_1298 at 1589.190 kb on - strand at 1589.226 kb on - strand at 1589.316 kb on + strand at 1589.417 kb on + strand at 1589.579 kb on + strand, within DvMF_1299 at 1589.587 kb on - strand, within DvMF_1299 at 1589.622 kb on + strand, within DvMF_1299 at 1589.854 kb on + strand, within DvMF_1299 at 1589.879 kb on - strand, within DvMF_1299 at 1590.058 kb on + strand, within DvMF_1300 at 1590.254 kb on + strand, within DvMF_1300 at 1590.462 kb on - strand, within DvMF_1300 at 1590.507 kb on + strand, within DvMF_1300 at 1590.509 kb on + strand, within DvMF_1300 at 1590.929 kb on + strand, within DvMF_1301 at 1591.014 kb on - strand, within DvMF_1301 at 1591.571 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,589,009 - DvMF_1298 0.83 -0.7 1,589,131 - DvMF_1298 0.88 -0.2 1,589,190 - -0.9 1,589,226 - -0.6 1,589,316 + +0.6 1,589,417 + -0.4 1,589,579 + DvMF_1299 0.32 -1.0 1,589,587 - DvMF_1299 0.34 -1.0 1,589,622 + DvMF_1299 0.40 -0.7 1,589,854 + DvMF_1299 0.82 -1.0 1,589,879 - DvMF_1299 0.87 +0.1 1,590,058 + DvMF_1300 0.14 -0.6 1,590,254 + DvMF_1300 0.38 +0.0 1,590,462 - DvMF_1300 0.64 -0.5 1,590,507 + DvMF_1300 0.70 -0.8 1,590,509 + DvMF_1300 0.70 -0.7 1,590,929 + DvMF_1301 0.27 -0.7 1,591,014 - DvMF_1301 0.38 -0.9 1,591,571 - -0.3
Or see this region's nucleotide sequence