Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0835 and DvMF_0836 are separated by 23 nucleotides DvMF_0836 and DvMF_0837 are separated by 3 nucleotides
DvMF_0835: DvMF_0835 - Beta-N-acetylhexosaminidase (RefSeq), at 1,007,571 to 1,009,331
_0835
DvMF_0836: DvMF_0836 - Hydantoinase/oxoprolinase (RefSeq), at 1,009,355 to 1,011,106
_0836
DvMF_0837: DvMF_0837 - 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq), at 1,011,110 to 1,012,198
_0837
Position (kb)
1009
1010
1011
1012 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1008.382 kb on - strand, within DvMF_0835 at 1008.656 kb on - strand, within DvMF_0835 at 1008.680 kb on - strand, within DvMF_0835 at 1008.977 kb on - strand, within DvMF_0835 at 1008.993 kb on + strand, within DvMF_0835 at 1009.272 kb on - strand at 1009.381 kb on + strand at 1009.415 kb on - strand at 1009.758 kb on + strand, within DvMF_0836 at 1009.771 kb on - strand, within DvMF_0836 at 1009.809 kb on + strand, within DvMF_0836 at 1009.842 kb on - strand, within DvMF_0836 at 1009.865 kb on + strand, within DvMF_0836 at 1009.873 kb on - strand, within DvMF_0836 at 1010.223 kb on - strand, within DvMF_0836 at 1010.331 kb on - strand, within DvMF_0836 at 1010.331 kb on - strand, within DvMF_0836 at 1010.444 kb on - strand, within DvMF_0836 at 1010.467 kb on + strand, within DvMF_0836 at 1011.138 kb on - strand at 1011.398 kb on - strand, within DvMF_0837 at 1011.737 kb on - strand, within DvMF_0837
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,008,382 - DvMF_0835 0.46 -0.3 1,008,656 - DvMF_0835 0.62 +2.2 1,008,680 - DvMF_0835 0.63 -0.2 1,008,977 - DvMF_0835 0.80 -0.3 1,008,993 + DvMF_0835 0.81 -1.1 1,009,272 - +0.2 1,009,381 + +0.1 1,009,415 - -1.0 1,009,758 + DvMF_0836 0.23 -1.3 1,009,771 - DvMF_0836 0.24 -2.2 1,009,809 + DvMF_0836 0.26 -3.1 1,009,842 - DvMF_0836 0.28 -2.0 1,009,865 + DvMF_0836 0.29 -3.9 1,009,873 - DvMF_0836 0.30 -1.4 1,010,223 - DvMF_0836 0.50 -2.1 1,010,331 - DvMF_0836 0.56 -1.6 1,010,331 - DvMF_0836 0.56 -2.3 1,010,444 - DvMF_0836 0.62 -2.1 1,010,467 + DvMF_0836 0.63 -2.4 1,011,138 - -1.3 1,011,398 - DvMF_0837 0.26 -1.0 1,011,737 - DvMF_0837 0.58 -0.6
Or see this region's nucleotide sequence