Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0757

Experiment: L-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_R0021 and DvMF_0756 are separated by 111 nucleotidesDvMF_0756 and DvMF_0757 are separated by 70 nucleotidesDvMF_0757 and DvMF_0758 are separated by 295 nucleotides DvMF_R0021: DvMF_R0021 - tRNA-Met (RefSeq), at 901,420 to 901,496 _R0021 DvMF_0756: DvMF_0756 - glycosyl transferase family 2 (RefSeq), at 901,608 to 902,336 _0756 DvMF_0757: DvMF_0757 - hypothetical protein (RefSeq), at 902,407 to 902,829 _0757 DvMF_0758: DvMF_0758 - SNARE associated Golgi protein (RefSeq), at 903,125 to 903,877 _0758 Position (kb) 902 903Strain fitness (log2 ratio) -1 0 1at 901.541 kb on - strandat 902.338 kb on - strandat 902.379 kb on + strandat 902.435 kb on - strandat 902.714 kb on + strand, within DvMF_0757

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
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901,541 - -1.1
902,338 - -0.3
902,379 + -0.1
902,435 - +0.0
902,714 + DvMF_0757 0.73 -1.0

Or see this region's nucleotide sequence