Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0655 and DvMF_0656 are separated by 97 nucleotides DvMF_0656 and DvMF_0657 are separated by 239 nucleotides
DvMF_0655: DvMF_0655 - ABC transporter related (RefSeq), at 789,721 to 790,773
_0655
DvMF_0656: DvMF_0656 - extracellular solute-binding protein family 1 (RefSeq), at 790,871 to 792,166
_0656
DvMF_0657: DvMF_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 792,406 to 793,299
_0657
Position (kb)
790
791
792
793 Strain fitness (log2 ratio)
-2
-1
0
1 at 789.871 kb on + strand, within DvMF_0655 at 789.925 kb on + strand, within DvMF_0655 at 790.087 kb on - strand, within DvMF_0655 at 790.140 kb on + strand, within DvMF_0655 at 790.147 kb on + strand, within DvMF_0655 at 790.400 kb on + strand, within DvMF_0655 at 790.559 kb on - strand, within DvMF_0655 at 790.578 kb on - strand, within DvMF_0655 at 790.621 kb on - strand, within DvMF_0655 at 790.778 kb on + strand at 790.805 kb on - strand at 791.053 kb on + strand, within DvMF_0656 at 791.094 kb on + strand, within DvMF_0656 at 791.278 kb on - strand, within DvMF_0656 at 791.456 kb on + strand, within DvMF_0656 at 791.510 kb on + strand, within DvMF_0656 at 791.574 kb on - strand, within DvMF_0656 at 791.621 kb on + strand, within DvMF_0656 at 791.844 kb on - strand, within DvMF_0656 at 792.038 kb on + strand at 792.052 kb on - strand at 792.409 kb on + strand at 792.610 kb on + strand, within DvMF_0657 at 792.658 kb on + strand, within DvMF_0657 at 792.686 kb on - strand, within DvMF_0657 at 792.910 kb on - strand, within DvMF_0657 at 793.083 kb on + strand, within DvMF_0657
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 789,871 + DvMF_0655 0.14 -0.7 789,925 + DvMF_0655 0.19 -0.9 790,087 - DvMF_0655 0.35 -1.4 790,140 + DvMF_0655 0.40 -0.6 790,147 + DvMF_0655 0.40 -0.8 790,400 + DvMF_0655 0.64 -0.1 790,559 - DvMF_0655 0.80 -0.3 790,578 - DvMF_0655 0.81 -0.7 790,621 - DvMF_0655 0.85 -0.2 790,778 + -0.7 790,805 - -0.7 791,053 + DvMF_0656 0.14 -1.1 791,094 + DvMF_0656 0.17 -0.1 791,278 - DvMF_0656 0.31 -1.8 791,456 + DvMF_0656 0.45 -1.1 791,510 + DvMF_0656 0.49 +0.3 791,574 - DvMF_0656 0.54 -0.6 791,621 + DvMF_0656 0.58 -1.6 791,844 - DvMF_0656 0.75 -0.1 792,038 + -0.4 792,052 - -0.8 792,409 + -0.2 792,610 + DvMF_0657 0.23 -0.5 792,658 + DvMF_0657 0.28 -0.5 792,686 - DvMF_0657 0.31 -0.5 792,910 - DvMF_0657 0.56 -0.6 793,083 + DvMF_0657 0.76 -0.5
Or see this region's nucleotide sequence