Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0521 and DvMF_0522 are separated by 136 nucleotides DvMF_0522 and DvMF_0523 are separated by 144 nucleotides
DvMF_0521: DvMF_0521 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 614,613 to 615,491
_0521
DvMF_0522: DvMF_0522 - ABC transporter related (RefSeq), at 615,628 to 616,377
_0522
DvMF_0523: DvMF_0523 - magnesium transporter (RefSeq), at 616,522 to 617,925
_0523
Position (kb) 615
616
617 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 614.673 kb on - strand at 614.704 kb on + strand, within DvMF_0521 at 614.720 kb on + strand, within DvMF_0521 at 614.811 kb on + strand, within DvMF_0521 at 614.966 kb on + strand, within DvMF_0521 at 615.085 kb on + strand, within DvMF_0521 at 615.293 kb on - strand, within DvMF_0521 at 615.336 kb on + strand, within DvMF_0521 at 615.355 kb on + strand, within DvMF_0521 at 615.614 kb on + strand at 615.962 kb on + strand, within DvMF_0522 at 615.972 kb on + strand, within DvMF_0522 at 615.990 kb on - strand, within DvMF_0522 at 616.037 kb on + strand, within DvMF_0522 at 616.206 kb on - strand, within DvMF_0522 at 616.224 kb on - strand, within DvMF_0522 at 616.229 kb on - strand, within DvMF_0522 at 616.250 kb on + strand, within DvMF_0522 at 616.358 kb on + strand at 616.415 kb on + strand at 616.417 kb on - strand at 616.527 kb on + strand at 616.763 kb on - strand, within DvMF_0523 at 617.156 kb on + strand, within DvMF_0523 at 617.324 kb on + strand, within DvMF_0523
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 614,673 - +1.8 614,704 + DvMF_0521 0.10 -0.2 614,720 + DvMF_0521 0.12 -0.9 614,811 + DvMF_0521 0.23 +0.2 614,966 + DvMF_0521 0.40 -0.6 615,085 + DvMF_0521 0.54 -0.8 615,293 - DvMF_0521 0.77 -1.0 615,336 + DvMF_0521 0.82 -0.7 615,355 + DvMF_0521 0.84 -0.7 615,614 + -1.1 615,962 + DvMF_0522 0.45 -0.5 615,972 + DvMF_0522 0.46 -0.8 615,990 - DvMF_0522 0.48 -0.5 616,037 + DvMF_0522 0.55 -3.9 616,206 - DvMF_0522 0.77 -1.6 616,224 - DvMF_0522 0.79 -0.6 616,229 - DvMF_0522 0.80 -1.8 616,250 + DvMF_0522 0.83 -1.2 616,358 + -0.5 616,415 + -0.8 616,417 - -1.2 616,527 + -0.5 616,763 - DvMF_0523 0.17 -0.8 617,156 + DvMF_0523 0.45 +0.3 617,324 + DvMF_0523 0.57 -0.4
Or see this region's nucleotide sequence