Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0483 and DvMF_0484 are separated by 115 nucleotides DvMF_0484 and DvMF_0485 are separated by 100 nucleotides DvMF_0485 and DvMF_0486 overlap by 4 nucleotides
DvMF_0483: DvMF_0483 - peptidase M48 Ste24p (RefSeq), at 567,426 to 568,898
_0483
DvMF_0484: DvMF_0484 - Appr-1-p processing domain protein (RefSeq), at 569,014 to 569,622
_0484
DvMF_0485: DvMF_0485 - ATP-dependent protease peptidase subunit (RefSeq), at 569,723 to 570,280
_0485
DvMF_0486: DvMF_0486 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (RefSeq), at 570,277 to 571,266
_0486
Position (kb) 569
570
571 Strain fitness (log2 ratio) -1
0
1 at 569.117 kb on - strand, within DvMF_0484 at 569.266 kb on + strand, within DvMF_0484 at 569.360 kb on + strand, within DvMF_0484 at 569.463 kb on + strand, within DvMF_0484 at 569.471 kb on - strand, within DvMF_0484 at 569.471 kb on - strand, within DvMF_0484 at 569.585 kb on - strand at 569.665 kb on + strand at 569.679 kb on - strand at 569.799 kb on + strand, within DvMF_0485 at 569.906 kb on - strand, within DvMF_0485 at 570.296 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 569,117 - DvMF_0484 0.17 +0.1 569,266 + DvMF_0484 0.41 -0.7 569,360 + DvMF_0484 0.57 -0.8 569,463 + DvMF_0484 0.74 -0.8 569,471 - DvMF_0484 0.75 -0.7 569,471 - DvMF_0484 0.75 -0.9 569,585 - -0.6 569,665 + -1.4 569,679 - -0.9 569,799 + DvMF_0485 0.14 -1.4 569,906 - DvMF_0485 0.33 -1.1 570,296 - -0.8
Or see this region's nucleotide sequence