Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0472 and DvMF_0473 are separated by 69 nucleotides DvMF_0473 and DvMF_0474 are separated by 168 nucleotides DvMF_0474 and DvMF_0475 are separated by 0 nucleotides
DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705
_0472
DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314
_0473
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
DvMF_0475: DvMF_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 556,951 to 557,424
_0475
Position (kb) 555
556
557 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 554.827 kb on - strand at 554.847 kb on - strand, within DvMF_0472 at 555.112 kb on + strand, within DvMF_0472 at 555.227 kb on - strand, within DvMF_0472 at 555.255 kb on + strand, within DvMF_0472 at 555.315 kb on - strand, within DvMF_0472 at 555.464 kb on + strand, within DvMF_0472 at 555.619 kb on - strand at 555.619 kb on - strand at 555.631 kb on - strand at 555.666 kb on + strand at 555.847 kb on + strand, within DvMF_0473 at 556.066 kb on - strand, within DvMF_0473 at 556.141 kb on + strand, within DvMF_0473 at 556.201 kb on + strand, within DvMF_0473 at 556.276 kb on - strand at 556.524 kb on + strand at 556.659 kb on - strand, within DvMF_0474 at 556.737 kb on + strand, within DvMF_0474 at 556.832 kb on + strand, within DvMF_0474 at 556.882 kb on + strand, within DvMF_0474 at 557.110 kb on - strand, within DvMF_0475 at 557.145 kb on - strand, within DvMF_0475
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 554,827 - -0.6 554,847 - DvMF_0472 0.11 +0.3 555,112 + DvMF_0472 0.39 +0.2 555,227 - DvMF_0472 0.51 -0.1 555,255 + DvMF_0472 0.53 +0.4 555,315 - DvMF_0472 0.60 +0.6 555,464 + DvMF_0472 0.75 -0.1 555,619 - +0.4 555,619 - -0.9 555,631 - +1.6 555,666 + +0.1 555,847 + DvMF_0473 0.13 +3.6 556,066 - DvMF_0473 0.54 -0.8 556,141 + DvMF_0473 0.68 -0.1 556,201 + DvMF_0473 0.79 -0.0 556,276 - +0.1 556,524 + -2.8 556,659 - DvMF_0474 0.38 -3.4 556,737 + DvMF_0474 0.54 -4.2 556,832 + DvMF_0474 0.75 -5.4 556,882 + DvMF_0474 0.85 -3.3 557,110 - DvMF_0475 0.34 -1.0 557,145 - DvMF_0475 0.41 -1.6
Or see this region's nucleotide sequence