Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0306 and hslU are separated by 231 nucleotides hslU and DvMF_0308 are separated by 268 nucleotides
DvMF_0306: DvMF_0306 - acetylglutamate kinase (RefSeq), at 352,491 to 353,453
_0306
DvMF_0307: hslU - ATP-dependent protease ATP-binding subunit HslU (RefSeq), at 353,685 to 355,136
hslU
DvMF_0308: DvMF_0308 - protease Do (RefSeq), at 355,405 to 356,850
_0308
Position (kb) 353
354
355
356 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 352.742 kb on + strand, within DvMF_0306 at 352.776 kb on - strand, within DvMF_0306 at 352.930 kb on - strand, within DvMF_0306 at 353.184 kb on + strand, within DvMF_0306 at 353.284 kb on + strand, within DvMF_0306 at 353.557 kb on + strand at 353.786 kb on - strand at 353.950 kb on + strand, within hslU at 354.111 kb on + strand, within hslU at 354.275 kb on - strand, within hslU at 354.288 kb on + strand, within hslU at 354.347 kb on + strand, within hslU at 355.129 kb on - strand at 355.217 kb on + strand at 355.293 kb on - strand at 355.524 kb on - strand at 355.658 kb on - strand, within DvMF_0308 at 355.770 kb on + strand, within DvMF_0308 at 355.772 kb on - strand, within DvMF_0308 at 355.778 kb on - strand, within DvMF_0308 at 355.778 kb on - strand, within DvMF_0308 at 355.778 kb on - strand, within DvMF_0308 at 355.797 kb on - strand, within DvMF_0308 at 355.817 kb on - strand, within DvMF_0308 at 355.852 kb on - strand, within DvMF_0308 at 356.083 kb on - strand, within DvMF_0308 at 356.124 kb on + strand, within DvMF_0308
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 352,742 + DvMF_0306 0.26 -4.6 352,776 - DvMF_0306 0.30 -4.6 352,930 - DvMF_0306 0.46 -4.7 353,184 + DvMF_0306 0.72 -3.7 353,284 + DvMF_0306 0.82 -2.6 353,557 + -0.2 353,786 - -1.2 353,950 + hslU DvMF_0307 0.18 -0.2 354,111 + hslU DvMF_0307 0.29 -1.1 354,275 - hslU DvMF_0307 0.41 +0.2 354,288 + hslU DvMF_0307 0.42 -2.5 354,347 + hslU DvMF_0307 0.46 -1.6 355,129 - -2.4 355,217 + -0.1 355,293 - -0.4 355,524 - -1.2 355,658 - DvMF_0308 0.17 -1.5 355,770 + DvMF_0308 0.25 +0.0 355,772 - DvMF_0308 0.25 -1.8 355,778 - DvMF_0308 0.26 +4.0 355,778 - DvMF_0308 0.26 -1.9 355,778 - DvMF_0308 0.26 -1.3 355,797 - DvMF_0308 0.27 -1.8 355,817 - DvMF_0308 0.28 -2.9 355,852 - DvMF_0308 0.31 -0.1 356,083 - DvMF_0308 0.47 -0.1 356,124 + DvMF_0308 0.50 -0.0
Or see this region's nucleotide sequence