Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0005 and DvMF_0006 are separated by 402 nucleotides DvMF_0006 and DvMF_R0001 are separated by 405 nucleotides DvMF_R0001 and DvMF_0007 are separated by 316 nucleotides
DvMF_0005: DvMF_0005 - methyltransferase small (RefSeq), at 6,402 to 7,196
_0005
DvMF_0006: DvMF_0006 - hypothetical protein (RefSeq), at 7,599 to 8,240
_0006
DvMF_R0001: DvMF_R0001 - tRNA-Gly (RefSeq), at 8,646 to 8,720
_R0001
DvMF_0007: DvMF_0007 - protein of unknown function DUF302 (RefSeq), at 9,037 to 9,444
_0007
Position (kb)
7
8
9 Strain fitness (log2 ratio)
-2
-1
0
1 at 6.739 kb on - strand, within DvMF_0005 at 6.739 kb on - strand, within DvMF_0005 at 6.763 kb on + strand, within DvMF_0005 at 6.831 kb on - strand, within DvMF_0005 at 6.937 kb on + strand, within DvMF_0005 at 6.994 kb on + strand, within DvMF_0005 at 7.210 kb on - strand at 7.295 kb on + strand at 7.295 kb on + strand at 7.412 kb on - strand at 7.689 kb on + strand, within DvMF_0006 at 7.803 kb on + strand, within DvMF_0006 at 7.953 kb on - strand, within DvMF_0006 at 7.972 kb on - strand, within DvMF_0006 at 8.083 kb on - strand, within DvMF_0006 at 8.096 kb on + strand, within DvMF_0006 at 8.254 kb on - strand at 8.339 kb on - strand at 8.505 kb on + strand at 8.633 kb on - strand at 8.683 kb on - strand, within DvMF_R0001 at 8.966 kb on - strand at 8.993 kb on - strand at 9.136 kb on - strand, within DvMF_0007 at 9.189 kb on + strand, within DvMF_0007
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 6,739 - DvMF_0005 0.42 -0.9 6,739 - DvMF_0005 0.42 -1.4 6,763 + DvMF_0005 0.45 -0.2 6,831 - DvMF_0005 0.54 -0.7 6,937 + DvMF_0005 0.67 -2.4 6,994 + DvMF_0005 0.74 -1.1 7,210 - -0.8 7,295 + -0.9 7,295 + -0.8 7,412 - -0.3 7,689 + DvMF_0006 0.14 +0.5 7,803 + DvMF_0006 0.32 +0.6 7,953 - DvMF_0006 0.55 -0.1 7,972 - DvMF_0006 0.58 +0.4 8,083 - DvMF_0006 0.75 +0.3 8,096 + DvMF_0006 0.77 -0.1 8,254 - +0.3 8,339 - -0.8 8,505 + -0.1 8,633 - -0.2 8,683 - DvMF_R0001 0.49 -0.4 8,966 - -0.6 8,993 - -0.4 9,136 - DvMF_0007 0.24 -0.5 9,189 + DvMF_0007 0.37 -0.5
Or see this region's nucleotide sequence