Experiment: Varel_Bryant medium with Zinc Pyrithione 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0875 and BT0876 are separated by 36 nucleotides BT0876 and BT0877 are separated by 70 nucleotides BT0877 and BT0878 are separated by 86 nucleotides
BT0875: BT0875 - beta-ureidopropionase (NCBI ptt file), at 1,076,614 to 1,077,498
BT0875
BT0876: BT0876 - conserved hypothetical protein (NCBI ptt file), at 1,077,535 to 1,078,650
BT0876
BT0877: BT0877 - ferredoxin domain containing protein (NCBI ptt file), at 1,078,721 to 1,079,263
BT0877
BT0878: BT0878 - ABC transporter, ATP-binding protein (NCBI ptt file), at 1,079,350 to 1,079,970
BT0878
Position (kb)
1077
1078
1079 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1076.547 kb on + strand at 1076.597 kb on - strand at 1076.723 kb on - strand, within BT0875 at 1076.806 kb on + strand, within BT0875 at 1076.906 kb on - strand, within BT0875 at 1076.976 kb on - strand, within BT0875 at 1077.043 kb on + strand, within BT0875 at 1077.044 kb on - strand, within BT0875 at 1077.110 kb on + strand, within BT0875 at 1077.204 kb on + strand, within BT0875 at 1077.212 kb on - strand, within BT0875 at 1077.253 kb on + strand, within BT0875 at 1077.506 kb on - strand at 1077.514 kb on - strand at 1077.521 kb on + strand at 1077.833 kb on - strand, within BT0876 at 1078.028 kb on - strand, within BT0876 at 1078.475 kb on + strand, within BT0876 at 1078.717 kb on + strand at 1078.723 kb on - strand at 1078.723 kb on - strand at 1078.925 kb on - strand, within BT0877 at 1079.028 kb on - strand, within BT0877 at 1079.099 kb on - strand, within BT0877 at 1079.223 kb on - strand at 1079.223 kb on - strand at 1079.225 kb on + strand at 1079.318 kb on - strand at 1079.355 kb on - strand at 1079.358 kb on + strand at 1079.443 kb on - strand, within BT0878 at 1079.558 kb on + strand, within BT0878
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Zinc Pyrithione 0.0125 mM remove 1,076,547 + -0.6 1,076,597 - +0.9 1,076,723 - BT0875 0.12 +0.9 1,076,806 + BT0875 0.22 -1.3 1,076,906 - BT0875 0.33 -1.5 1,076,976 - BT0875 0.41 -2.5 1,077,043 + BT0875 0.48 -0.5 1,077,044 - BT0875 0.49 -1.3 1,077,110 + BT0875 0.56 -0.1 1,077,204 + BT0875 0.67 -1.6 1,077,212 - BT0875 0.68 +0.9 1,077,253 + BT0875 0.72 -2.5 1,077,506 - -0.7 1,077,514 - -1.2 1,077,521 + -1.9 1,077,833 - BT0876 0.27 -0.7 1,078,028 - BT0876 0.44 -1.5 1,078,475 + BT0876 0.84 -2.3 1,078,717 + +1.9 1,078,723 - +0.3 1,078,723 - -0.7 1,078,925 - BT0877 0.38 -1.3 1,079,028 - BT0877 0.57 -0.4 1,079,099 - BT0877 0.70 -0.5 1,079,223 - -1.4 1,079,223 - +0.0 1,079,225 + +1.9 1,079,318 - -0.8 1,079,355 - -1.7 1,079,358 + -1.5 1,079,443 - BT0878 0.15 -0.7 1,079,558 + BT0878 0.33 +1.9
Or see this region's nucleotide sequence