Experiment: Varel_Bryant medium with Zinc Pyrithione 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0382 and BT0383 are separated by 2 nucleotides BT0383 and BT0384 are separated by 721 nucleotides
BT0382: BT0382 - capsular polysaccharide biosynthesis protein Cps4K (NCBI ptt file), at 469,853 to 471,058
BT0382
BT0383: BT0383 - putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file), at 471,061 to 472,254
BT0383
BT0384: BT0384 - hypothetical protein (NCBI ptt file), at 472,976 to 474,109
BT0384
Position (kb) 471
472
473 Strain fitness (log2 ratio) -2
-1
0
1
2 at 470.138 kb on - strand, within BT0382 at 470.244 kb on + strand, within BT0382 at 470.249 kb on + strand, within BT0382 at 470.261 kb on - strand, within BT0382 at 470.261 kb on - strand, within BT0382 at 470.341 kb on + strand, within BT0382 at 470.374 kb on + strand, within BT0382 at 470.377 kb on - strand, within BT0382 at 470.417 kb on - strand, within BT0382 at 470.517 kb on - strand, within BT0382 at 470.646 kb on - strand, within BT0382 at 470.655 kb on - strand, within BT0382 at 470.765 kb on - strand, within BT0382 at 470.766 kb on + strand, within BT0382 at 470.766 kb on + strand, within BT0382 at 470.916 kb on + strand, within BT0382 at 470.917 kb on - strand, within BT0382 at 471.035 kb on + strand at 471.036 kb on - strand at 471.044 kb on - strand at 471.114 kb on + strand at 471.291 kb on + strand, within BT0383 at 471.292 kb on - strand, within BT0383 at 471.292 kb on - strand, within BT0383 at 471.402 kb on + strand, within BT0383 at 471.457 kb on - strand, within BT0383 at 471.518 kb on + strand, within BT0383 at 471.703 kb on + strand, within BT0383 at 471.796 kb on + strand, within BT0383 at 471.796 kb on + strand, within BT0383 at 471.976 kb on - strand, within BT0383 at 472.137 kb on + strand at 472.138 kb on - strand at 472.211 kb on - strand at 472.279 kb on + strand at 472.445 kb on + strand at 472.485 kb on - strand at 472.511 kb on - strand at 472.527 kb on + strand at 472.528 kb on - strand at 472.528 kb on - strand at 472.614 kb on + strand at 472.658 kb on + strand at 472.659 kb on - strand at 472.659 kb on - strand at 472.659 kb on - strand at 472.659 kb on - strand at 472.692 kb on + strand at 472.714 kb on - strand at 472.775 kb on + strand at 472.781 kb on + strand at 472.799 kb on - strand at 472.813 kb on + strand at 472.816 kb on - strand at 472.861 kb on - strand at 472.864 kb on - strand at 472.972 kb on - strand at 472.991 kb on + strand at 472.991 kb on + strand at 472.992 kb on - strand at 472.993 kb on + strand at 473.003 kb on + strand at 473.147 kb on + strand, within BT0384 at 473.185 kb on - strand, within BT0384 at 473.190 kb on - strand, within BT0384
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Zinc Pyrithione 0.0125 mM remove 470,138 - BT0382 0.24 -1.6 470,244 + BT0382 0.32 -0.7 470,249 + BT0382 0.33 -2.3 470,261 - BT0382 0.34 -0.8 470,261 - BT0382 0.34 -0.2 470,341 + BT0382 0.40 -0.9 470,374 + BT0382 0.43 -0.7 470,377 - BT0382 0.43 +0.1 470,417 - BT0382 0.47 -0.5 470,517 - BT0382 0.55 -0.4 470,646 - BT0382 0.66 -1.2 470,655 - BT0382 0.67 -1.0 470,765 - BT0382 0.76 +0.6 470,766 + BT0382 0.76 -1.2 470,766 + BT0382 0.76 -0.4 470,916 + BT0382 0.88 -1.7 470,917 - BT0382 0.88 -0.7 471,035 + -0.7 471,036 - +0.3 471,044 - -0.7 471,114 + +0.8 471,291 + BT0383 0.19 -0.7 471,292 - BT0383 0.19 -0.7 471,292 - BT0383 0.19 -0.7 471,402 + BT0383 0.29 -0.2 471,457 - BT0383 0.33 -1.5 471,518 + BT0383 0.38 -1.3 471,703 + BT0383 0.54 -2.5 471,796 + BT0383 0.62 -0.2 471,796 + BT0383 0.62 -0.4 471,976 - BT0383 0.77 -2.0 472,137 + +0.8 472,138 - +0.3 472,211 - -1.3 472,279 + +1.8 472,445 + -2.1 472,485 - +0.3 472,511 - -0.0 472,527 + +0.1 472,528 - -1.3 472,528 - -0.7 472,614 + +0.8 472,658 + +1.8 472,659 - +2.4 472,659 - -0.2 472,659 - -1.5 472,659 - -1.7 472,692 + +0.8 472,714 - -0.1 472,775 + -1.2 472,781 + -0.8 472,799 - -0.7 472,813 + -0.3 472,816 - -0.2 472,861 - -0.7 472,864 - -1.2 472,972 - -2.5 472,991 + -0.5 472,991 + -0.2 472,992 - -1.0 472,993 + +0.8 473,003 + -0.2 473,147 + BT0384 0.15 +0.8 473,185 - BT0384 0.18 -0.5 473,190 - BT0384 0.19 -0.7
Or see this region's nucleotide sequence