Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20520 and IAI47_20525 are separated by 362 nucleotides IAI47_20525 and IAI47_20530 are separated by 55 nucleotides
IAI47_20520: IAI47_20520 - maltose/maltodextrin ABC transporter ATP-binding protein MalK, at 353,249 to 354,358
_20520
IAI47_20525: IAI47_20525 - maltose/maltodextrin ABC transporter substrate-binding protein MalE, at 354,721 to 355,911
_20525
IAI47_20530: IAI47_20530 - maltose ABC transporter permease MalF, at 355,967 to 357,493
_20530
Position (kb) 354
355
356 Strain fitness (log2 ratio) -2
-1
0
1
2 at 353.793 kb on + strand, within IAI47_20520 at 353.794 kb on - strand, within IAI47_20520 at 353.794 kb on - strand, within IAI47_20520 at 353.819 kb on - strand, within IAI47_20520 at 354.074 kb on - strand, within IAI47_20520 at 354.074 kb on - strand, within IAI47_20520 at 354.074 kb on - strand, within IAI47_20520 at 354.100 kb on - strand, within IAI47_20520 at 354.109 kb on - strand, within IAI47_20520 at 354.109 kb on - strand, within IAI47_20520 at 354.109 kb on - strand, within IAI47_20520 at 354.109 kb on - strand, within IAI47_20520 at 354.260 kb on + strand at 354.260 kb on + strand at 354.260 kb on + strand at 354.261 kb on - strand at 354.283 kb on + strand at 354.295 kb on + strand at 354.295 kb on + strand at 354.296 kb on - strand at 354.341 kb on + strand at 354.341 kb on + strand at 354.342 kb on - strand at 354.373 kb on + strand at 354.373 kb on + strand at 354.373 kb on + strand at 354.373 kb on + strand at 354.373 kb on + strand at 354.373 kb on + strand at 354.374 kb on - strand at 354.381 kb on + strand at 354.381 kb on + strand at 354.381 kb on + strand at 354.381 kb on + strand at 354.382 kb on - strand at 354.422 kb on + strand at 354.422 kb on + strand at 354.422 kb on + strand at 354.422 kb on + strand at 354.422 kb on + strand at 354.423 kb on - strand at 354.577 kb on + strand at 354.578 kb on - strand at 354.578 kb on - strand at 354.589 kb on + strand at 354.635 kb on + strand at 354.636 kb on - strand at 354.636 kb on - strand at 354.667 kb on + strand at 354.668 kb on - strand at 354.721 kb on - strand at 354.721 kb on - strand at 354.847 kb on + strand, within IAI47_20525 at 354.848 kb on - strand, within IAI47_20525 at 354.897 kb on + strand, within IAI47_20525 at 354.898 kb on - strand, within IAI47_20525 at 354.898 kb on - strand, within IAI47_20525 at 354.937 kb on + strand, within IAI47_20525 at 354.937 kb on + strand, within IAI47_20525 at 354.975 kb on + strand, within IAI47_20525 at 354.975 kb on + strand, within IAI47_20525 at 354.975 kb on + strand, within IAI47_20525 at 354.976 kb on - strand, within IAI47_20525 at 354.976 kb on - strand, within IAI47_20525 at 355.102 kb on - strand, within IAI47_20525 at 355.148 kb on - strand, within IAI47_20525 at 355.148 kb on - strand, within IAI47_20525 at 355.206 kb on + strand, within IAI47_20525 at 355.207 kb on - strand, within IAI47_20525 at 355.240 kb on - strand, within IAI47_20525 at 355.240 kb on - strand, within IAI47_20525 at 355.240 kb on - strand, within IAI47_20525 at 355.261 kb on + strand, within IAI47_20525 at 355.261 kb on + strand, within IAI47_20525 at 355.261 kb on + strand, within IAI47_20525 at 355.262 kb on - strand, within IAI47_20525 at 355.262 kb on - strand, within IAI47_20525 at 355.262 kb on - strand, within IAI47_20525 at 355.262 kb on - strand, within IAI47_20525 at 355.297 kb on + strand, within IAI47_20525 at 355.297 kb on + strand, within IAI47_20525 at 355.298 kb on - strand, within IAI47_20525 at 355.324 kb on + strand, within IAI47_20525 at 355.426 kb on + strand, within IAI47_20525 at 355.426 kb on + strand, within IAI47_20525 at 355.426 kb on + strand, within IAI47_20525 at 355.427 kb on - strand, within IAI47_20525 at 355.427 kb on - strand, within IAI47_20525 at 355.476 kb on + strand, within IAI47_20525 at 355.530 kb on + strand, within IAI47_20525 at 355.645 kb on + strand, within IAI47_20525 at 355.646 kb on - strand, within IAI47_20525 at 355.646 kb on - strand, within IAI47_20525 at 355.646 kb on - strand, within IAI47_20525 at 355.646 kb on - strand, within IAI47_20525 at 355.646 kb on - strand, within IAI47_20525 at 355.678 kb on - strand, within IAI47_20525 at 355.680 kb on + strand, within IAI47_20525 at 355.680 kb on + strand, within IAI47_20525 at 355.680 kb on + strand, within IAI47_20525 at 355.681 kb on - strand, within IAI47_20525 at 355.681 kb on - strand, within IAI47_20525 at 355.747 kb on - strand, within IAI47_20525 at 355.882 kb on - strand at 355.909 kb on + strand at 355.909 kb on + strand at 355.909 kb on + strand at 355.909 kb on + strand at 355.910 kb on - strand at 355.910 kb on - strand at 355.910 kb on - strand at 355.910 kb on - strand at 355.912 kb on + strand at 355.912 kb on + strand at 355.913 kb on - strand at 355.913 kb on - strand at 355.913 kb on - strand at 356.043 kb on - strand at 356.043 kb on - strand at 356.052 kb on + strand at 356.052 kb on + strand at 356.052 kb on + strand at 356.053 kb on - strand at 356.053 kb on - strand at 356.060 kb on + strand at 356.060 kb on + strand at 356.061 kb on - strand at 356.075 kb on + strand at 356.075 kb on + strand at 356.076 kb on - strand at 356.076 kb on - strand at 356.076 kb on - strand at 356.076 kb on - strand at 356.131 kb on + strand, within IAI47_20530 at 356.131 kb on + strand, within IAI47_20530 at 356.132 kb on - strand, within IAI47_20530 at 356.144 kb on + strand, within IAI47_20530 at 356.145 kb on - strand, within IAI47_20530 at 356.156 kb on + strand, within IAI47_20530 at 356.156 kb on + strand, within IAI47_20530 at 356.156 kb on + strand, within IAI47_20530 at 356.156 kb on + strand, within IAI47_20530 at 356.156 kb on + strand, within IAI47_20530 at 356.157 kb on - strand, within IAI47_20530 at 356.157 kb on - strand, within IAI47_20530 at 356.162 kb on + strand, within IAI47_20530 at 356.222 kb on - strand, within IAI47_20530 at 356.230 kb on + strand, within IAI47_20530 at 356.230 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.237 kb on + strand, within IAI47_20530 at 356.238 kb on - strand, within IAI47_20530 at 356.238 kb on - strand, within IAI47_20530 at 356.238 kb on - strand, within IAI47_20530 at 356.238 kb on - strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.242 kb on + strand, within IAI47_20530 at 356.243 kb on - strand, within IAI47_20530 at 356.243 kb on - strand, within IAI47_20530 at 356.243 kb on - strand, within IAI47_20530 at 356.243 kb on - strand, within IAI47_20530 at 356.249 kb on - strand, within IAI47_20530 at 356.280 kb on + strand, within IAI47_20530 at 356.280 kb on + strand, within IAI47_20530 at 356.280 kb on + strand, within IAI47_20530 at 356.294 kb on - strand, within IAI47_20530 at 356.473 kb on + strand, within IAI47_20530 at 356.580 kb on - strand, within IAI47_20530 at 356.657 kb on + strand, within IAI47_20530 at 356.657 kb on + strand, within IAI47_20530 at 356.657 kb on + strand, within IAI47_20530 at 356.658 kb on - strand, within IAI47_20530 at 356.680 kb on + strand, within IAI47_20530 at 356.680 kb on + strand, within IAI47_20530 at 356.680 kb on + strand, within IAI47_20530 at 356.680 kb on + strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.681 kb on - strand, within IAI47_20530 at 356.700 kb on + strand, within IAI47_20530 at 356.701 kb on - strand, within IAI47_20530 at 356.701 kb on - strand, within IAI47_20530 at 356.701 kb on - strand, within IAI47_20530 at 356.713 kb on + strand, within IAI47_20530 at 356.714 kb on - strand, within IAI47_20530 at 356.752 kb on + strand, within IAI47_20530 at 356.752 kb on + strand, within IAI47_20530 at 356.752 kb on + strand, within IAI47_20530 at 356.752 kb on + strand, within IAI47_20530 at 356.752 kb on + strand, within IAI47_20530 at 356.753 kb on - strand, within IAI47_20530 at 356.787 kb on + strand, within IAI47_20530
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 353,793 + IAI47_20520 0.49 +0.9 353,794 - IAI47_20520 0.49 -1.5 353,794 - IAI47_20520 0.49 +0.4 353,819 - IAI47_20520 0.51 -0.1 354,074 - IAI47_20520 0.74 -0.1 354,074 - IAI47_20520 0.74 -0.8 354,074 - IAI47_20520 0.74 +0.9 354,100 - IAI47_20520 0.77 -1.3 354,109 - IAI47_20520 0.77 -0.0 354,109 - IAI47_20520 0.77 -0.2 354,109 - IAI47_20520 0.77 -0.8 354,109 - IAI47_20520 0.77 +1.7 354,260 + -2.1 354,260 + -1.2 354,260 + -0.3 354,261 - -0.7 354,283 + +1.2 354,295 + +1.2 354,295 + +0.9 354,296 - -1.3 354,341 + +1.4 354,341 + -0.2 354,342 - -0.9 354,373 + -1.2 354,373 + +0.3 354,373 + +0.5 354,373 + +0.8 354,373 + +1.0 354,373 + +2.6 354,374 - +0.3 354,381 + +1.2 354,381 + +0.2 354,381 + +0.4 354,381 + +0.2 354,382 - +0.7 354,422 + +0.2 354,422 + +1.2 354,422 + +0.8 354,422 + +1.3 354,422 + +0.8 354,423 - -0.3 354,577 + +0.5 354,578 - +1.3 354,578 - +1.9 354,589 + +0.2 354,635 + +0.2 354,636 - -0.8 354,636 - -0.4 354,667 + -0.7 354,668 - +0.9 354,721 - -0.8 354,721 - -0.6 354,847 + IAI47_20525 0.11 +0.4 354,848 - IAI47_20525 0.11 +0.7 354,897 + IAI47_20525 0.15 +0.2 354,898 - IAI47_20525 0.15 +0.9 354,898 - IAI47_20525 0.15 -0.9 354,937 + IAI47_20525 0.18 -1.2 354,937 + IAI47_20525 0.18 +0.2 354,975 + IAI47_20525 0.21 -0.1 354,975 + IAI47_20525 0.21 +0.2 354,975 + IAI47_20525 0.21 -0.7 354,976 - IAI47_20525 0.21 -0.6 354,976 - IAI47_20525 0.21 -0.5 355,102 - IAI47_20525 0.32 -2.2 355,148 - IAI47_20525 0.36 -0.3 355,148 - IAI47_20525 0.36 +0.2 355,206 + IAI47_20525 0.41 -0.9 355,207 - IAI47_20525 0.41 +2.2 355,240 - IAI47_20525 0.44 -0.2 355,240 - IAI47_20525 0.44 +0.2 355,240 - IAI47_20525 0.44 -0.4 355,261 + IAI47_20525 0.45 -0.7 355,261 + IAI47_20525 0.45 -0.4 355,261 + IAI47_20525 0.45 -1.2 355,262 - IAI47_20525 0.45 -1.0 355,262 - IAI47_20525 0.45 -2.5 355,262 - IAI47_20525 0.45 -0.3 355,262 - IAI47_20525 0.45 -0.3 355,297 + IAI47_20525 0.48 -0.6 355,297 + IAI47_20525 0.48 +0.4 355,298 - IAI47_20525 0.48 -0.7 355,324 + IAI47_20525 0.51 -0.8 355,426 + IAI47_20525 0.59 -0.6 355,426 + IAI47_20525 0.59 -0.7 355,426 + IAI47_20525 0.59 +0.4 355,427 - IAI47_20525 0.59 +1.7 355,427 - IAI47_20525 0.59 -0.3 355,476 + IAI47_20525 0.63 +0.3 355,530 + IAI47_20525 0.68 +2.3 355,645 + IAI47_20525 0.78 -0.4 355,646 - IAI47_20525 0.78 +0.1 355,646 - IAI47_20525 0.78 -0.5 355,646 - IAI47_20525 0.78 +0.9 355,646 - IAI47_20525 0.78 +0.9 355,646 - IAI47_20525 0.78 +1.5 355,678 - IAI47_20525 0.80 -0.7 355,680 + IAI47_20525 0.81 +0.0 355,680 + IAI47_20525 0.81 +0.5 355,680 + IAI47_20525 0.81 -0.1 355,681 - IAI47_20525 0.81 +0.9 355,681 - IAI47_20525 0.81 -1.3 355,747 - IAI47_20525 0.86 +1.7 355,882 - -0.1 355,909 + -0.4 355,909 + -0.2 355,909 + -0.4 355,909 + -0.7 355,910 - +0.3 355,910 - +0.5 355,910 - +0.1 355,910 - +1.5 355,912 + -0.1 355,912 + -0.7 355,913 - +1.5 355,913 - -0.6 355,913 - +0.2 356,043 - +0.6 356,043 - +1.2 356,052 + -0.3 356,052 + -0.3 356,052 + -0.3 356,053 - +0.7 356,053 - -0.3 356,060 + -0.0 356,060 + +1.5 356,061 - +0.2 356,075 + +1.1 356,075 + -0.4 356,076 - -0.7 356,076 - -0.1 356,076 - -1.3 356,076 - -0.4 356,131 + IAI47_20530 0.11 +2.1 356,131 + IAI47_20530 0.11 -2.0 356,132 - IAI47_20530 0.11 -0.6 356,144 + IAI47_20530 0.12 +0.4 356,145 - IAI47_20530 0.12 +0.8 356,156 + IAI47_20530 0.12 +1.3 356,156 + IAI47_20530 0.12 +0.0 356,156 + IAI47_20530 0.12 +0.3 356,156 + IAI47_20530 0.12 +1.2 356,156 + IAI47_20530 0.12 +0.5 356,157 - IAI47_20530 0.12 -0.7 356,157 - IAI47_20530 0.12 +0.1 356,162 + IAI47_20530 0.13 +0.5 356,222 - IAI47_20530 0.17 +1.7 356,230 + IAI47_20530 0.17 +0.6 356,230 + IAI47_20530 0.17 -0.5 356,237 + IAI47_20530 0.18 -1.8 356,237 + IAI47_20530 0.18 -1.1 356,237 + IAI47_20530 0.18 -1.3 356,237 + IAI47_20530 0.18 +0.7 356,237 + IAI47_20530 0.18 +0.6 356,237 + IAI47_20530 0.18 +1.4 356,237 + IAI47_20530 0.18 +1.7 356,237 + IAI47_20530 0.18 +0.4 356,237 + IAI47_20530 0.18 -0.7 356,238 - IAI47_20530 0.18 -0.3 356,238 - IAI47_20530 0.18 +0.2 356,238 - IAI47_20530 0.18 -0.7 356,238 - IAI47_20530 0.18 +0.3 356,242 + IAI47_20530 0.18 -0.6 356,242 + IAI47_20530 0.18 -0.2 356,242 + IAI47_20530 0.18 -0.3 356,242 + IAI47_20530 0.18 +1.5 356,242 + IAI47_20530 0.18 +0.9 356,242 + IAI47_20530 0.18 -0.6 356,242 + IAI47_20530 0.18 +0.2 356,242 + IAI47_20530 0.18 -1.3 356,242 + IAI47_20530 0.18 +1.1 356,242 + IAI47_20530 0.18 +0.0 356,243 - IAI47_20530 0.18 +0.4 356,243 - IAI47_20530 0.18 -0.1 356,243 - IAI47_20530 0.18 -1.8 356,243 - IAI47_20530 0.18 +0.3 356,249 - IAI47_20530 0.18 -0.1 356,280 + IAI47_20530 0.20 +2.4 356,280 + IAI47_20530 0.20 -1.1 356,280 + IAI47_20530 0.20 -0.6 356,294 - IAI47_20530 0.21 +0.4 356,473 + IAI47_20530 0.33 -1.3 356,580 - IAI47_20530 0.40 -0.1 356,657 + IAI47_20530 0.45 +0.4 356,657 + IAI47_20530 0.45 -0.8 356,657 + IAI47_20530 0.45 +1.4 356,658 - IAI47_20530 0.45 +0.0 356,680 + IAI47_20530 0.47 +0.4 356,680 + IAI47_20530 0.47 +1.7 356,680 + IAI47_20530 0.47 +0.9 356,680 + IAI47_20530 0.47 -0.3 356,681 - IAI47_20530 0.47 -1.6 356,681 - IAI47_20530 0.47 -0.2 356,681 - IAI47_20530 0.47 -0.4 356,681 - IAI47_20530 0.47 -0.5 356,681 - IAI47_20530 0.47 +1.7 356,681 - IAI47_20530 0.47 +1.2 356,681 - IAI47_20530 0.47 -0.1 356,681 - IAI47_20530 0.47 +0.0 356,681 - IAI47_20530 0.47 -0.5 356,681 - IAI47_20530 0.47 +0.7 356,681 - IAI47_20530 0.47 +0.7 356,681 - IAI47_20530 0.47 +0.2 356,681 - IAI47_20530 0.47 -1.3 356,700 + IAI47_20530 0.48 -0.3 356,701 - IAI47_20530 0.48 +1.6 356,701 - IAI47_20530 0.48 +0.4 356,701 - IAI47_20530 0.48 +0.0 356,713 + IAI47_20530 0.49 -0.6 356,714 - IAI47_20530 0.49 -0.3 356,752 + IAI47_20530 0.51 -0.7 356,752 + IAI47_20530 0.51 +2.6 356,752 + IAI47_20530 0.51 -0.7 356,752 + IAI47_20530 0.51 +1.0 356,752 + IAI47_20530 0.51 +0.7 356,753 - IAI47_20530 0.51 -0.9 356,787 + IAI47_20530 0.54 +1.3
Or see this region's nucleotide sequence