Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_02245 and IAI47_02250 are separated by 40 nucleotides IAI47_02250 and IAI47_02255 are separated by 95 nucleotides IAI47_02255 and IAI47_02260 are separated by 0 nucleotides IAI47_02260 and IAI47_02265 are separated by 59 nucleotides
IAI47_02245: IAI47_02245 - DNA-directed RNA polymerase subunit alpha, at 468,235 to 469,224
_02245
IAI47_02250: IAI47_02250 - 50S ribosomal protein L17, at 469,265 to 469,651
_02250
IAI47_02255: IAI47_02255 - DUF1992 domain-containing protein, at 469,747 to 470,118
_02255
IAI47_02260: IAI47_02260 - Zn(2+)-responsive transcriptional regulator, at 470,119 to 470,535
_02260
IAI47_02265: IAI47_02265 - alternative ribosome-rescue factor A, at 470,595 to 470,882
_02265
Position (kb) 469
470 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 469.690 kb on + strand at 469.691 kb on - strand at 469.704 kb on + strand at 469.704 kb on + strand at 469.704 kb on + strand at 469.705 kb on - strand at 469.705 kb on - strand at 469.707 kb on + strand at 469.707 kb on + strand at 469.707 kb on + strand at 469.708 kb on - strand at 469.712 kb on + strand at 469.712 kb on + strand at 469.713 kb on - strand at 469.713 kb on - strand at 469.713 kb on - strand at 469.713 kb on - strand at 469.713 kb on - strand at 469.719 kb on + strand at 469.719 kb on + strand at 469.720 kb on - strand at 469.720 kb on - strand at 469.720 kb on - strand at 469.720 kb on - strand at 469.720 kb on - strand at 469.727 kb on + strand at 469.727 kb on + strand at 469.727 kb on + strand at 469.727 kb on + strand at 469.728 kb on - strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.742 kb on + strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.743 kb on - strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.746 kb on + strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.747 kb on - strand at 469.779 kb on + strand at 469.779 kb on + strand at 469.779 kb on + strand at 469.779 kb on + strand at 469.779 kb on + strand at 469.780 kb on - strand at 469.780 kb on - strand at 469.780 kb on - strand at 469.780 kb on - strand at 469.794 kb on - strand, within IAI47_02255 at 469.794 kb on - strand, within IAI47_02255 at 469.794 kb on - strand, within IAI47_02255 at 469.794 kb on - strand, within IAI47_02255 at 469.830 kb on + strand, within IAI47_02255 at 469.830 kb on + strand, within IAI47_02255 at 469.830 kb on + strand, within IAI47_02255 at 469.831 kb on - strand, within IAI47_02255 at 469.831 kb on - strand, within IAI47_02255 at 469.831 kb on - strand, within IAI47_02255 at 469.831 kb on - strand, within IAI47_02255 at 469.874 kb on + strand, within IAI47_02255 at 469.874 kb on + strand, within IAI47_02255 at 469.874 kb on + strand, within IAI47_02255 at 469.875 kb on - strand, within IAI47_02255 at 469.875 kb on - strand, within IAI47_02255 at 469.875 kb on - strand, within IAI47_02255 at 469.875 kb on - strand, within IAI47_02255 at 469.931 kb on + strand, within IAI47_02255 at 469.931 kb on + strand, within IAI47_02255 at 469.932 kb on - strand, within IAI47_02255 at 469.953 kb on + strand, within IAI47_02255 at 469.953 kb on + strand, within IAI47_02255 at 469.954 kb on - strand, within IAI47_02255 at 469.954 kb on - strand, within IAI47_02255 at 469.954 kb on - strand, within IAI47_02255 at 469.954 kb on - strand, within IAI47_02255 at 469.962 kb on + strand, within IAI47_02255 at 469.962 kb on + strand, within IAI47_02255 at 469.963 kb on - strand, within IAI47_02255 at 469.963 kb on - strand, within IAI47_02255 at 469.963 kb on - strand, within IAI47_02255 at 469.963 kb on - strand, within IAI47_02255 at 469.993 kb on + strand, within IAI47_02255 at 470.030 kb on + strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.031 kb on - strand, within IAI47_02255 at 470.036 kb on + strand, within IAI47_02255 at 470.036 kb on + strand, within IAI47_02255 at 470.036 kb on + strand, within IAI47_02255 at 470.036 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.049 kb on + strand, within IAI47_02255 at 470.050 kb on - strand, within IAI47_02255 at 470.050 kb on - strand, within IAI47_02255 at 470.116 kb on + strand at 470.116 kb on + strand at 470.117 kb on - strand at 470.117 kb on - strand at 470.138 kb on + strand at 470.138 kb on + strand at 470.138 kb on + strand at 470.139 kb on - strand at 470.139 kb on - strand at 470.139 kb on - strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.142 kb on + strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.143 kb on - strand at 470.179 kb on + strand, within IAI47_02260 at 470.180 kb on - strand, within IAI47_02260 at 470.236 kb on + strand, within IAI47_02260 at 470.237 kb on - strand, within IAI47_02260 at 470.238 kb on + strand, within IAI47_02260 at 470.238 kb on + strand, within IAI47_02260 at 470.239 kb on - strand, within IAI47_02260 at 470.295 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.389 kb on + strand, within IAI47_02260 at 470.390 kb on - strand, within IAI47_02260 at 470.390 kb on - strand, within IAI47_02260 at 470.390 kb on - strand, within IAI47_02260 at 470.390 kb on - strand, within IAI47_02260 at 470.390 kb on - strand, within IAI47_02260 at 470.417 kb on + strand, within IAI47_02260 at 470.479 kb on - strand, within IAI47_02260 at 470.533 kb on + strand at 470.533 kb on + strand at 470.533 kb on + strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.534 kb on - strand at 470.539 kb on + strand at 470.539 kb on + strand at 470.539 kb on + strand at 470.540 kb on - strand at 470.540 kb on - strand at 470.545 kb on + strand at 470.546 kb on - strand at 470.546 kb on - strand at 470.546 kb on - strand at 470.563 kb on + strand at 470.568 kb on + strand at 470.568 kb on + strand at 470.568 kb on + strand at 470.568 kb on + strand at 470.569 kb on - strand at 470.578 kb on + strand at 470.578 kb on + strand at 470.578 kb on + strand at 470.578 kb on + strand at 470.578 kb on + strand at 470.579 kb on - strand at 470.579 kb on - strand at 470.579 kb on - strand at 470.579 kb on - strand at 470.579 kb on - strand at 470.580 kb on + strand at 470.580 kb on + strand at 470.580 kb on + strand at 470.581 kb on - strand at 470.581 kb on - strand at 470.581 kb on - strand at 470.581 kb on - strand at 470.581 kb on - strand at 470.600 kb on + strand at 470.601 kb on - strand at 470.601 kb on - strand at 470.601 kb on - strand at 470.601 kb on - strand at 470.601 kb on - strand at 470.604 kb on + strand at 470.605 kb on - strand at 470.605 kb on - strand at 470.605 kb on - strand at 470.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 469,690 + -0.6 469,691 - -0.1 469,704 + -0.9 469,704 + -1.4 469,704 + -1.2 469,705 - -2.9 469,705 - +0.8 469,707 + -2.0 469,707 + -0.2 469,707 + -0.4 469,708 - -1.8 469,712 + -1.3 469,712 + -0.6 469,713 - -0.1 469,713 - -2.3 469,713 - -1.2 469,713 - +0.0 469,713 - -1.1 469,719 + -1.3 469,719 + -0.3 469,720 - -2.9 469,720 - -2.5 469,720 - +0.2 469,720 - -1.3 469,720 - -0.6 469,727 + -1.4 469,727 + +0.4 469,727 + -0.3 469,727 + +0.2 469,728 - -1.4 469,742 + -1.8 469,742 + -1.0 469,742 + -0.6 469,742 + -1.4 469,742 + +0.8 469,742 + -1.1 469,742 + -1.3 469,742 + -1.7 469,742 + +1.3 469,742 + -1.3 469,742 + -0.9 469,743 - -1.5 469,743 - -0.7 469,743 - -3.0 469,743 - -1.6 469,743 - -1.3 469,743 - -0.9 469,743 - -3.3 469,746 + -0.4 469,746 + -1.5 469,746 + -1.2 469,746 + -0.4 469,746 + -1.3 469,746 + +0.3 469,746 + -0.9 469,746 + -0.9 469,746 + +0.1 469,746 + -1.0 469,746 + -0.0 469,747 - -0.3 469,747 - -0.8 469,747 - -1.4 469,747 - -1.0 469,747 - -2.5 469,747 - -0.4 469,747 - -1.2 469,747 - -1.2 469,747 - -1.3 469,747 - -0.4 469,747 - -2.0 469,747 - -0.8 469,747 - -0.9 469,747 - +1.0 469,747 - +0.3 469,747 - -1.9 469,779 + -1.9 469,779 + +0.5 469,779 + -0.8 469,779 + -1.8 469,779 + -0.2 469,780 - -0.1 469,780 - -2.2 469,780 - -1.0 469,780 - -1.4 469,794 - IAI47_02255 0.13 -0.6 469,794 - IAI47_02255 0.13 +0.5 469,794 - IAI47_02255 0.13 -1.2 469,794 - IAI47_02255 0.13 -1.9 469,830 + IAI47_02255 0.22 -1.8 469,830 + IAI47_02255 0.22 -0.1 469,830 + IAI47_02255 0.22 +0.0 469,831 - IAI47_02255 0.23 -2.5 469,831 - IAI47_02255 0.23 -1.0 469,831 - IAI47_02255 0.23 -0.0 469,831 - IAI47_02255 0.23 -0.6 469,874 + IAI47_02255 0.34 -2.7 469,874 + IAI47_02255 0.34 -0.2 469,874 + IAI47_02255 0.34 -1.5 469,875 - IAI47_02255 0.34 -1.1 469,875 - IAI47_02255 0.34 -0.7 469,875 - IAI47_02255 0.34 -1.4 469,875 - IAI47_02255 0.34 -1.7 469,931 + IAI47_02255 0.49 -0.9 469,931 + IAI47_02255 0.49 -1.3 469,932 - IAI47_02255 0.50 -1.9 469,953 + IAI47_02255 0.55 -0.6 469,953 + IAI47_02255 0.55 -0.9 469,954 - IAI47_02255 0.56 -0.6 469,954 - IAI47_02255 0.56 -2.0 469,954 - IAI47_02255 0.56 +0.8 469,954 - IAI47_02255 0.56 -0.2 469,962 + IAI47_02255 0.58 -2.4 469,962 + IAI47_02255 0.58 -2.7 469,963 - IAI47_02255 0.58 -2.0 469,963 - IAI47_02255 0.58 -0.2 469,963 - IAI47_02255 0.58 -0.4 469,963 - IAI47_02255 0.58 -0.2 469,993 + IAI47_02255 0.66 -0.4 470,030 + IAI47_02255 0.76 -1.8 470,031 - IAI47_02255 0.76 -1.4 470,031 - IAI47_02255 0.76 -0.6 470,031 - IAI47_02255 0.76 -0.3 470,031 - IAI47_02255 0.76 -3.0 470,031 - IAI47_02255 0.76 +0.0 470,031 - IAI47_02255 0.76 -0.8 470,031 - IAI47_02255 0.76 -1.1 470,036 + IAI47_02255 0.78 +0.3 470,036 + IAI47_02255 0.78 +0.3 470,036 + IAI47_02255 0.78 -0.5 470,036 + IAI47_02255 0.78 -1.0 470,049 + IAI47_02255 0.81 +0.2 470,049 + IAI47_02255 0.81 -0.2 470,049 + IAI47_02255 0.81 +0.6 470,049 + IAI47_02255 0.81 -1.5 470,049 + IAI47_02255 0.81 -1.7 470,049 + IAI47_02255 0.81 -2.4 470,050 - IAI47_02255 0.81 -0.5 470,050 - IAI47_02255 0.81 -1.9 470,116 + -1.2 470,116 + -1.2 470,117 - -2.2 470,117 - +0.2 470,138 + -1.3 470,138 + +0.4 470,138 + -1.3 470,139 - -2.2 470,139 - +0.2 470,139 - -2.8 470,142 + -2.9 470,142 + -1.0 470,142 + -1.4 470,142 + -2.8 470,142 + +1.3 470,142 + -1.6 470,142 + -0.4 470,142 + -1.3 470,142 + -2.6 470,142 + -1.3 470,142 + -0.3 470,142 + -2.1 470,143 - +0.2 470,143 - -1.1 470,143 - -1.9 470,143 - -1.8 470,143 - -1.8 470,143 - -2.7 470,143 - -1.3 470,143 - +0.8 470,143 - -2.1 470,143 - -1.3 470,179 + IAI47_02260 0.14 -0.0 470,180 - IAI47_02260 0.15 -1.0 470,236 + IAI47_02260 0.28 +1.5 470,237 - IAI47_02260 0.28 -0.6 470,238 + IAI47_02260 0.29 -1.9 470,238 + IAI47_02260 0.29 +0.5 470,239 - IAI47_02260 0.29 -2.0 470,295 + IAI47_02260 0.42 -2.7 470,389 + IAI47_02260 0.65 -1.1 470,389 + IAI47_02260 0.65 -0.2 470,389 + IAI47_02260 0.65 -2.5 470,389 + IAI47_02260 0.65 -2.5 470,389 + IAI47_02260 0.65 +0.3 470,389 + IAI47_02260 0.65 -1.5 470,390 - IAI47_02260 0.65 -1.8 470,390 - IAI47_02260 0.65 -2.1 470,390 - IAI47_02260 0.65 -1.0 470,390 - IAI47_02260 0.65 -0.7 470,390 - IAI47_02260 0.65 -1.3 470,417 + IAI47_02260 0.71 -1.1 470,479 - IAI47_02260 0.86 -3.1 470,533 + -0.8 470,533 + -1.5 470,533 + -2.2 470,534 - -0.6 470,534 - -1.5 470,534 - +1.5 470,534 - -1.5 470,534 - -2.0 470,534 - -1.6 470,534 - -0.7 470,539 + -0.8 470,539 + -0.7 470,539 + -0.8 470,540 - -1.3 470,540 - -1.8 470,545 + +0.1 470,546 - -1.2 470,546 - -2.5 470,546 - -2.2 470,563 + -0.9 470,568 + -0.5 470,568 + -0.4 470,568 + +0.3 470,568 + -1.0 470,569 - -0.6 470,578 + +0.3 470,578 + +1.1 470,578 + +0.7 470,578 + +0.8 470,578 + -0.1 470,579 - -0.5 470,579 - -2.3 470,579 - -1.5 470,579 - -1.9 470,579 - -0.3 470,580 + -1.1 470,580 + -0.2 470,580 + -0.4 470,581 - -1.4 470,581 - -1.8 470,581 - -2.0 470,581 - -0.2 470,581 - -1.9 470,600 + -0.3 470,601 - +0.7 470,601 - -1.4 470,601 - -1.0 470,601 - -1.4 470,601 - +0.3 470,604 + +0.8 470,605 - -2.0 470,605 - -0.3 470,605 - +0.1 470,605 - -2.4
Or see this region's nucleotide sequence