Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03910 and H281DRAFT_03911 are separated by 115 nucleotides H281DRAFT_03911 and H281DRAFT_03912 are separated by 266 nucleotides H281DRAFT_03912 and H281DRAFT_03913 are separated by 76 nucleotides
H281DRAFT_03910: H281DRAFT_03910 - membrane-bound lytic murein transglycosylase B, at 6,527 to 7,765
_03910
H281DRAFT_03911: H281DRAFT_03911 - cysteine synthase, at 7,881 to 8,783
_03911
H281DRAFT_03912: H281DRAFT_03912 - competence protein ComEA, at 9,050 to 9,415
_03912
H281DRAFT_03913: H281DRAFT_03913 - ADP-glyceromanno-heptose 6-epimerase precursor, at 9,492 to 10,484
_03913
Position (kb) 7
8
9 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 7.094 kb on - strand, within H281DRAFT_03910 at 7.124 kb on - strand, within H281DRAFT_03910 at 7.169 kb on + strand, within H281DRAFT_03910 at 7.169 kb on + strand, within H281DRAFT_03910 at 7.169 kb on + strand, within H281DRAFT_03910 at 7.170 kb on - strand, within H281DRAFT_03910 at 7.170 kb on - strand, within H281DRAFT_03910 at 7.223 kb on + strand, within H281DRAFT_03910 at 7.224 kb on - strand, within H281DRAFT_03910 at 7.286 kb on + strand, within H281DRAFT_03910 at 7.287 kb on - strand, within H281DRAFT_03910 at 7.352 kb on + strand, within H281DRAFT_03910 at 7.353 kb on - strand, within H281DRAFT_03910 at 7.353 kb on - strand, within H281DRAFT_03910 at 7.589 kb on + strand, within H281DRAFT_03910 at 7.589 kb on + strand, within H281DRAFT_03910 at 7.589 kb on + strand, within H281DRAFT_03910 at 7.589 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.591 kb on + strand, within H281DRAFT_03910 at 7.592 kb on - strand, within H281DRAFT_03910 at 7.592 kb on - strand, within H281DRAFT_03910 at 7.614 kb on - strand, within H281DRAFT_03910 at 7.646 kb on + strand at 7.647 kb on - strand at 7.763 kb on + strand at 7.763 kb on + strand at 7.763 kb on + strand at 7.764 kb on - strand at 7.771 kb on - strand at 7.771 kb on - strand at 7.801 kb on + strand at 7.803 kb on + strand at 7.803 kb on + strand at 7.804 kb on - strand at 7.804 kb on - strand at 7.804 kb on - strand at 7.804 kb on - strand at 7.804 kb on - strand at 7.804 kb on - strand at 7.809 kb on + strand at 7.874 kb on + strand at 8.784 kb on - strand at 8.784 kb on - strand at 8.786 kb on - strand at 9.051 kb on + strand at 9.083 kb on - strand at 9.088 kb on + strand, within H281DRAFT_03912 at 9.088 kb on + strand, within H281DRAFT_03912 at 9.200 kb on - strand, within H281DRAFT_03912 at 9.416 kb on - strand at 9.431 kb on + strand at 9.431 kb on + strand at 9.432 kb on - strand at 9.472 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 7,094 - H281DRAFT_03910 0.46 +0.1 7,124 - H281DRAFT_03910 0.48 -0.1 7,169 + H281DRAFT_03910 0.52 +0.7 7,169 + H281DRAFT_03910 0.52 +0.6 7,169 + H281DRAFT_03910 0.52 +0.5 7,170 - H281DRAFT_03910 0.52 -0.3 7,170 - H281DRAFT_03910 0.52 -0.1 7,223 + H281DRAFT_03910 0.56 -0.2 7,224 - H281DRAFT_03910 0.56 +0.6 7,286 + H281DRAFT_03910 0.61 -1.4 7,287 - H281DRAFT_03910 0.61 +0.4 7,352 + H281DRAFT_03910 0.67 +1.0 7,353 - H281DRAFT_03910 0.67 +0.2 7,353 - H281DRAFT_03910 0.67 -0.1 7,589 + H281DRAFT_03910 0.86 -0.2 7,589 + H281DRAFT_03910 0.86 +0.3 7,589 + H281DRAFT_03910 0.86 +0.6 7,589 + H281DRAFT_03910 0.86 +0.0 7,591 + H281DRAFT_03910 0.86 +0.2 7,591 + H281DRAFT_03910 0.86 +1.2 7,591 + H281DRAFT_03910 0.86 +1.3 7,591 + H281DRAFT_03910 0.86 +1.0 7,591 + H281DRAFT_03910 0.86 +1.6 7,591 + H281DRAFT_03910 0.86 -0.8 7,592 - H281DRAFT_03910 0.86 +1.1 7,592 - H281DRAFT_03910 0.86 +0.1 7,614 - H281DRAFT_03910 0.88 +0.1 7,646 + +0.8 7,647 - -2.0 7,763 + +1.3 7,763 + -0.6 7,763 + +1.0 7,764 - -0.3 7,771 - +0.4 7,771 - -1.4 7,801 + -0.6 7,803 + -0.7 7,803 + -0.2 7,804 - -0.0 7,804 - +0.7 7,804 - +0.1 7,804 - +0.1 7,804 - -0.6 7,804 - +0.2 7,809 + -2.0 7,874 + +0.7 8,784 - -0.4 8,784 - -0.0 8,786 - +0.7 9,051 + +0.4 9,083 - +4.0 9,088 + H281DRAFT_03912 0.10 +0.5 9,088 + H281DRAFT_03912 0.10 +0.4 9,200 - H281DRAFT_03912 0.41 -0.2 9,416 - +0.6 9,431 + +1.2 9,431 + +0.3 9,432 - -0.0 9,472 + -0.3
Or see this region's nucleotide sequence