Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03424 and H281DRAFT_03425 are separated by 132 nucleotides H281DRAFT_03425 and H281DRAFT_03426 are separated by 349 nucleotides
H281DRAFT_03424: H281DRAFT_03424 - Sugar phosphate permease, at 498,337 to 499,665
_03424
H281DRAFT_03425: H281DRAFT_03425 - transcriptional regulator, LacI family, at 499,798 to 500,865
_03425
H281DRAFT_03426: H281DRAFT_03426 - cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-), at 501,215 to 502,108
_03426
Position (kb) 499
500
501 Strain fitness (log2 ratio) -2
-1
0
1
2 at 498.911 kb on + strand, within H281DRAFT_03424 at 499.099 kb on + strand, within H281DRAFT_03424 at 499.102 kb on + strand, within H281DRAFT_03424 at 499.172 kb on + strand, within H281DRAFT_03424 at 499.173 kb on - strand, within H281DRAFT_03424 at 499.176 kb on + strand, within H281DRAFT_03424 at 499.176 kb on + strand, within H281DRAFT_03424 at 499.177 kb on - strand, within H281DRAFT_03424 at 499.179 kb on + strand, within H281DRAFT_03424 at 499.179 kb on + strand, within H281DRAFT_03424 at 499.390 kb on + strand, within H281DRAFT_03424 at 499.391 kb on - strand, within H281DRAFT_03424 at 500.880 kb on + strand at 501.084 kb on - strand at 501.145 kb on + strand at 501.146 kb on - strand at 501.180 kb on - strand at 501.214 kb on + strand at 501.214 kb on + strand at 501.215 kb on - strand at 501.449 kb on + strand, within H281DRAFT_03426 at 501.449 kb on + strand, within H281DRAFT_03426 at 501.449 kb on + strand, within H281DRAFT_03426 at 501.449 kb on + strand, within H281DRAFT_03426 at 501.824 kb on + strand, within H281DRAFT_03426
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 498,911 + H281DRAFT_03424 0.43 -0.1 499,099 + H281DRAFT_03424 0.57 -0.5 499,102 + H281DRAFT_03424 0.58 -1.5 499,172 + H281DRAFT_03424 0.63 +2.5 499,173 - H281DRAFT_03424 0.63 +0.4 499,176 + H281DRAFT_03424 0.63 -0.6 499,176 + H281DRAFT_03424 0.63 +0.7 499,177 - H281DRAFT_03424 0.63 -1.2 499,179 + H281DRAFT_03424 0.63 +1.1 499,179 + H281DRAFT_03424 0.63 +0.7 499,390 + H281DRAFT_03424 0.79 +0.3 499,391 - H281DRAFT_03424 0.79 +0.3 500,880 + +0.6 501,084 - +0.4 501,145 + +0.3 501,146 - +0.7 501,180 - -0.1 501,214 + +0.3 501,214 + +0.4 501,215 - -1.2 501,449 + H281DRAFT_03426 0.26 -1.8 501,449 + H281DRAFT_03426 0.26 -0.3 501,449 + H281DRAFT_03426 0.26 +0.0 501,449 + H281DRAFT_03426 0.26 +0.4 501,824 + H281DRAFT_03426 0.68 -0.5
Or see this region's nucleotide sequence