Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02466 and H281DRAFT_02467 are separated by 96 nucleotides H281DRAFT_02467 and H281DRAFT_02468 are separated by 531 nucleotides
H281DRAFT_02466: H281DRAFT_02466 - glutathione-independent formaldehyde dehydrogenase, at 34,526 to 35,725
_02466
H281DRAFT_02467: H281DRAFT_02467 - transcriptional regulator, AraC family with amidase-like domain, at 35,822 to 36,817
_02467
H281DRAFT_02468: H281DRAFT_02468 - serine hydroxymethyltransferase, at 37,349 to 38,623
_02468
Position (kb) 35
36
37 Strain fitness (log2 ratio) -2
-1
0
1 at 34.902 kb on - strand, within H281DRAFT_02466 at 34.902 kb on - strand, within H281DRAFT_02466 at 35.096 kb on + strand, within H281DRAFT_02466 at 35.314 kb on - strand, within H281DRAFT_02466 at 35.432 kb on + strand, within H281DRAFT_02466 at 35.555 kb on + strand, within H281DRAFT_02466 at 35.556 kb on - strand, within H281DRAFT_02466 at 36.021 kb on + strand at 36.687 kb on + strand, within H281DRAFT_02467 at 36.688 kb on - strand, within H281DRAFT_02467 at 36.689 kb on + strand, within H281DRAFT_02467 at 36.726 kb on - strand at 36.841 kb on + strand at 36.842 kb on - strand at 36.843 kb on + strand at 36.900 kb on + strand at 36.900 kb on + strand at 37.121 kb on + strand at 37.414 kb on + strand at 37.551 kb on - strand, within H281DRAFT_02468 at 37.553 kb on + strand, within H281DRAFT_02468 at 37.569 kb on - strand, within H281DRAFT_02468 at 37.569 kb on - strand, within H281DRAFT_02468 at 37.793 kb on + strand, within H281DRAFT_02468 at 37.794 kb on - strand, within H281DRAFT_02468
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 34,902 - H281DRAFT_02466 0.31 +0.2 34,902 - H281DRAFT_02466 0.31 -0.1 35,096 + H281DRAFT_02466 0.47 +0.0 35,314 - H281DRAFT_02466 0.66 -1.2 35,432 + H281DRAFT_02466 0.76 +1.2 35,555 + H281DRAFT_02466 0.86 -1.8 35,556 - H281DRAFT_02466 0.86 -0.1 36,021 + -0.8 36,687 + H281DRAFT_02467 0.87 +0.5 36,688 - H281DRAFT_02467 0.87 +0.6 36,689 + H281DRAFT_02467 0.87 -0.1 36,726 - -1.7 36,841 + -0.5 36,842 - -2.0 36,843 + +1.0 36,900 + +0.6 36,900 + -2.4 37,121 + +0.1 37,414 + +0.2 37,551 - H281DRAFT_02468 0.16 -1.1 37,553 + H281DRAFT_02468 0.16 -0.1 37,569 - H281DRAFT_02468 0.17 +0.3 37,569 - H281DRAFT_02468 0.17 +0.2 37,793 + H281DRAFT_02468 0.35 -0.2 37,794 - H281DRAFT_02468 0.35 -1.2
Or see this region's nucleotide sequence