Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02126 and H281DRAFT_02127 are separated by 166 nucleotides H281DRAFT_02127 and H281DRAFT_02128 are separated by 396 nucleotides
H281DRAFT_02126: H281DRAFT_02126 - uracil-xanthine permease, at 259,215 to 260,522
_02126
H281DRAFT_02127: H281DRAFT_02127 - methyl-accepting chemotaxis protein, at 260,689 to 262,254
_02127
H281DRAFT_02128: H281DRAFT_02128 - hypothetical protein, at 262,651 to 263,289
_02128
Position (kb) 260
261
262
263 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 259.714 kb on - strand, within H281DRAFT_02126 at 259.903 kb on + strand at 259.903 kb on + strand, within H281DRAFT_02126 at 259.904 kb on - strand, within H281DRAFT_02126 at 259.904 kb on - strand, within H281DRAFT_02126 at 260.043 kb on - strand, within H281DRAFT_02126 at 260.155 kb on + strand, within H281DRAFT_02126 at 260.275 kb on + strand, within H281DRAFT_02126 at 260.276 kb on - strand, within H281DRAFT_02126 at 260.276 kb on - strand, within H281DRAFT_02126 at 260.591 kb on + strand at 260.591 kb on + strand at 260.603 kb on + strand at 261.322 kb on + strand, within H281DRAFT_02127 at 261.584 kb on + strand, within H281DRAFT_02127 at 261.702 kb on - strand, within H281DRAFT_02127 at 261.870 kb on + strand, within H281DRAFT_02127 at 261.870 kb on + strand, within H281DRAFT_02127 at 261.870 kb on + strand, within H281DRAFT_02127 at 261.871 kb on - strand, within H281DRAFT_02127 at 261.948 kb on - strand, within H281DRAFT_02127 at 261.957 kb on - strand at 262.031 kb on + strand, within H281DRAFT_02127 at 262.095 kb on - strand, within H281DRAFT_02127 at 262.109 kb on + strand at 262.109 kb on + strand at 262.110 kb on - strand at 262.110 kb on - strand at 262.377 kb on + strand at 262.378 kb on - strand at 262.407 kb on + strand at 262.474 kb on + strand at 262.502 kb on - strand at 262.554 kb on + strand at 262.554 kb on + strand at 262.555 kb on - strand at 262.555 kb on - strand at 262.555 kb on - strand at 262.574 kb on + strand at 262.574 kb on + strand at 262.694 kb on + strand at 262.758 kb on - strand, within H281DRAFT_02128
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 259,714 - H281DRAFT_02126 0.38 +0.9 259,903 + +0.8 259,903 + H281DRAFT_02126 0.53 -0.1 259,904 - H281DRAFT_02126 0.53 +1.3 259,904 - H281DRAFT_02126 0.53 +0.9 260,043 - H281DRAFT_02126 0.63 +0.9 260,155 + H281DRAFT_02126 0.72 +0.3 260,275 + H281DRAFT_02126 0.81 +0.4 260,276 - H281DRAFT_02126 0.81 +0.7 260,276 - H281DRAFT_02126 0.81 +0.2 260,591 + +0.9 260,591 + -0.4 260,603 + +0.9 261,322 + H281DRAFT_02127 0.40 +0.0 261,584 + H281DRAFT_02127 0.57 +2.5 261,702 - H281DRAFT_02127 0.65 -0.2 261,870 + H281DRAFT_02127 0.75 +0.7 261,870 + H281DRAFT_02127 0.75 -0.0 261,870 + H281DRAFT_02127 0.75 +0.5 261,871 - H281DRAFT_02127 0.75 +0.4 261,948 - H281DRAFT_02127 0.80 -3.1 261,957 - +0.4 262,031 + H281DRAFT_02127 0.86 -1.3 262,095 - H281DRAFT_02127 0.90 -1.7 262,109 + -0.9 262,109 + +2.2 262,110 - +0.5 262,110 - +0.3 262,377 + +0.2 262,378 - -0.4 262,407 + -0.5 262,474 + +0.7 262,502 - +0.7 262,554 + +0.5 262,554 + +0.7 262,555 - -0.4 262,555 - +0.1 262,555 - -0.5 262,574 + +1.1 262,574 + +0.0 262,694 + +1.9 262,758 - H281DRAFT_02128 0.17 +1.0
Or see this region's nucleotide sequence