Experiment: Valeric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02098 and H281DRAFT_02099 are separated by 191 nucleotides H281DRAFT_02099 and H281DRAFT_02100 are separated by 309 nucleotides
H281DRAFT_02098: H281DRAFT_02098 - sulfate transport system substrate-binding protein, at 224,824 to 225,849
_02098
H281DRAFT_02099: H281DRAFT_02099 - hypothetical protein, at 226,041 to 226,643
_02099
H281DRAFT_02100: H281DRAFT_02100 - glyoxylate/hydroxypyruvate reductase A, at 226,953 to 227,894
_02100
Position (kb) 226
227 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 225.350 kb on + strand, within H281DRAFT_02098 at 225.351 kb on - strand, within H281DRAFT_02098 at 225.351 kb on - strand, within H281DRAFT_02098 at 225.351 kb on - strand, within H281DRAFT_02098 at 225.354 kb on + strand, within H281DRAFT_02098 at 225.354 kb on + strand, within H281DRAFT_02098 at 225.354 kb on + strand, within H281DRAFT_02098 at 225.354 kb on + strand, within H281DRAFT_02098 at 225.355 kb on - strand, within H281DRAFT_02098 at 225.355 kb on - strand, within H281DRAFT_02098 at 225.355 kb on - strand, within H281DRAFT_02098 at 225.356 kb on + strand, within H281DRAFT_02098 at 225.475 kb on - strand, within H281DRAFT_02098 at 225.713 kb on + strand, within H281DRAFT_02098 at 225.735 kb on - strand, within H281DRAFT_02098 at 225.843 kb on - strand at 225.843 kb on - strand at 225.843 kb on - strand at 225.994 kb on + strand at 225.994 kb on + strand at 226.421 kb on + strand, within H281DRAFT_02099 at 226.422 kb on - strand, within H281DRAFT_02099 at 226.824 kb on - strand at 226.829 kb on + strand at 226.829 kb on + strand at 226.969 kb on - strand at 227.083 kb on + strand, within H281DRAFT_02100 at 227.084 kb on - strand, within H281DRAFT_02100 at 227.260 kb on - strand, within H281DRAFT_02100 at 227.264 kb on - strand, within H281DRAFT_02100 at 227.264 kb on - strand, within H281DRAFT_02100 at 227.264 kb on - strand, within H281DRAFT_02100 at 227.283 kb on + strand, within H281DRAFT_02100 at 227.284 kb on - strand, within H281DRAFT_02100 at 227.304 kb on + strand, within H281DRAFT_02100 at 227.339 kb on - strand, within H281DRAFT_02100 at 227.339 kb on - strand, within H281DRAFT_02100 at 227.449 kb on - strand, within H281DRAFT_02100 at 227.450 kb on + strand, within H281DRAFT_02100 at 227.451 kb on - strand, within H281DRAFT_02100 at 227.451 kb on - strand, within H281DRAFT_02100 at 227.483 kb on + strand, within H281DRAFT_02100 at 227.484 kb on - strand, within H281DRAFT_02100 at 227.616 kb on + strand, within H281DRAFT_02100 at 227.616 kb on + strand, within H281DRAFT_02100 at 227.617 kb on - strand, within H281DRAFT_02100 at 227.617 kb on - strand, within H281DRAFT_02100
Per-strain Table
Position Strand Gene LocusTag Fraction Valeric (C) remove 225,350 + H281DRAFT_02098 0.51 +0.8 225,351 - H281DRAFT_02098 0.51 +0.4 225,351 - H281DRAFT_02098 0.51 +0.4 225,351 - H281DRAFT_02098 0.51 -0.5 225,354 + H281DRAFT_02098 0.52 -0.3 225,354 + H281DRAFT_02098 0.52 +0.5 225,354 + H281DRAFT_02098 0.52 +0.2 225,354 + H281DRAFT_02098 0.52 +1.4 225,355 - H281DRAFT_02098 0.52 -2.1 225,355 - H281DRAFT_02098 0.52 +0.5 225,355 - H281DRAFT_02098 0.52 +1.2 225,356 + H281DRAFT_02098 0.52 +0.4 225,475 - H281DRAFT_02098 0.63 +0.2 225,713 + H281DRAFT_02098 0.87 -0.6 225,735 - H281DRAFT_02098 0.89 +0.7 225,843 - -0.7 225,843 - -0.2 225,843 - +1.0 225,994 + -0.5 225,994 + -0.4 226,421 + H281DRAFT_02099 0.63 -1.2 226,422 - H281DRAFT_02099 0.63 +0.4 226,824 - -0.6 226,829 + +0.2 226,829 + -0.4 226,969 - -0.0 227,083 + H281DRAFT_02100 0.14 +1.5 227,084 - H281DRAFT_02100 0.14 +0.3 227,260 - H281DRAFT_02100 0.33 -3.3 227,264 - H281DRAFT_02100 0.33 -0.2 227,264 - H281DRAFT_02100 0.33 -1.1 227,264 - H281DRAFT_02100 0.33 -0.9 227,283 + H281DRAFT_02100 0.35 -0.5 227,284 - H281DRAFT_02100 0.35 +0.0 227,304 + H281DRAFT_02100 0.37 -0.2 227,339 - H281DRAFT_02100 0.41 -0.7 227,339 - H281DRAFT_02100 0.41 -0.4 227,449 - H281DRAFT_02100 0.53 +0.2 227,450 + H281DRAFT_02100 0.53 +1.5 227,451 - H281DRAFT_02100 0.53 -0.7 227,451 - H281DRAFT_02100 0.53 -0.3 227,483 + H281DRAFT_02100 0.56 +0.1 227,484 - H281DRAFT_02100 0.56 +0.3 227,616 + H281DRAFT_02100 0.70 -0.0 227,616 + H281DRAFT_02100 0.70 -0.3 227,617 - H281DRAFT_02100 0.70 -2.5 227,617 - H281DRAFT_02100 0.70 -0.5
Or see this region's nucleotide sequence