Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2308

Experiment: sodium bromide 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium bromide 0.0125 M
2,731,789	+		Pf6N2E2_2305	0.88	-0.6
2,731,790	-		Pf6N2E2_2305	0.88	+0.5
2,731,790	-		Pf6N2E2_2305	0.88	-0.0
2,731,885	+				-0.4
2,731,885	+				-1.0
2,731,885	+				-1.0
2,731,886	-				-0.3
2,732,138	+		Pf6N2E2_2306	0.29	+0.0
2,732,138	+		Pf6N2E2_2306	0.29	-0.3
2,732,138	+		Pf6N2E2_2306	0.29	+0.2
2,732,138	+		Pf6N2E2_2306	0.29	+0.0
2,732,139	-		Pf6N2E2_2306	0.29	+1.1
2,732,336	+		Pf6N2E2_2306	0.61	-0.7
2,732,337	-		Pf6N2E2_2306	0.61	+0.7
2,732,594	-				+0.2
2,732,594	-				-0.4
2,732,662	-		Pf6N2E2_2307	0.34	+0.1
2,732,793	+				+1.0
2,732,793	+				+0.3
2,732,793	+				-0.0
2,732,794	-				+0.3
2,732,924	-		Pf6N2E2_2308	0.15	-0.3
2,732,924	-		Pf6N2E2_2308	0.15	+0.5
2,733,027	+		Pf6N2E2_2308	0.26	-1.1
2,733,350	+		Pf6N2E2_2308	0.60	+0.1
2,733,385	+		Pf6N2E2_2308	0.64	-1.0
2,733,386	-		Pf6N2E2_2308	0.64	-0.4
2,733,386	-		Pf6N2E2_2308	0.64	-0.7
2,733,390	-		Pf6N2E2_2308	0.64	-0.2
2,733,553	+		Pf6N2E2_2308	0.81	-0.6
2,733,553	+		Pf6N2E2_2308	0.81	-0.5
2,733,553	+		Pf6N2E2_2308	0.81	-0.8
2,733,554	-		Pf6N2E2_2308	0.81	-0.7
2,733,609	+		Pf6N2E2_2308	0.87	+1.0
2,733,610	-		Pf6N2E2_2308	0.87	-1.2
2,733,610	-		Pf6N2E2_2308	0.87	+0.1
2,733,633	-		Pf6N2E2_2308	0.90	+0.8
2,733,664	+				-1.5
2,733,665	-				+0.3
2,733,670	+				-0.2
2,733,671	-				+0.2
2,733,730	+				-0.6
2,733,731	-				-0.3
2,733,873	+				+0.2
2,733,873	+				+0.5
2,733,873	+				-0.2
2,733,874	-				+0.6
2,733,874	-				+0.4
2,734,034	-				-0.7
2,734,212	-		Pf6N2E2_2309	0.36	-0.8
2,734,214	+		Pf6N2E2_2309	0.37	+0.2
2,734,239	-		Pf6N2E2_2309	0.48	-1.0
2,734,239	-		Pf6N2E2_2309	0.48	-1.8
2,734,270	-				-0.4
2,734,271	+				-0.1
2,734,271	+				+0.3
2,734,271	+				-1.6
2,734,271	+				-0.8
2,734,271	+				-2.0
2,734,272	-				-0.6
2,734,272	-				-1.0
2,734,275	+				+0.0
2,734,275	+				-1.7
2,734,275	+				+1.5
2,734,275	+				-1.0
2,734,275	+				-0.5
2,734,276	-				-0.1
2,734,276	-				-1.6
2,734,276	-				-1.4
2,734,276	-				-1.7
2,734,276	-				-1.1
2,734,278	-				+0.1
2,734,278	-				-0.8
2,734,283	-				-2.8
2,734,283	-				-2.5
2,734,283	-				-0.7
2,734,476	+		Pf6N2E2_2310	0.16	-0.7
2,734,476	+		Pf6N2E2_2310	0.16	+0.3
2,734,477	-		Pf6N2E2_2310	0.16	-0.3
2,734,477	-		Pf6N2E2_2310	0.16	-0.4
2,734,480	-		Pf6N2E2_2310	0.16	-0.8
2,734,480	-		Pf6N2E2_2310	0.16	-1.1
2,734,480	-		Pf6N2E2_2310	0.16	-0.6
2,734,480	-		Pf6N2E2_2310	0.16	+0.0
2,734,480	-		Pf6N2E2_2310	0.16	-2.3
2,734,594	-		Pf6N2E2_2310	0.24	+1.3
2,734,612	-		Pf6N2E2_2310	0.26	-1.0
2,734,665	+		Pf6N2E2_2310	0.29	-0.6
2,734,666	-		Pf6N2E2_2310	0.29	+0.8
2,734,666	-				+1.5
2,734,716	+		Pf6N2E2_2310	0.33	+0.4
2,734,716	+		Pf6N2E2_2310	0.33	+0.2
2,734,716	+		Pf6N2E2_2310	0.33	-1.2
2,734,717	-		Pf6N2E2_2310	0.33	-0.7
2,734,717	-		Pf6N2E2_2310	0.33	-0.5
2,734,724	+		Pf6N2E2_2310	0.33	+0.2