Strain Fitness in Pantoea sp. MT58 around IAI47_08795

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,858,479	+		IAI47_08785	0.81	-2.4
1,858,479	+		IAI47_08785	0.81	+0.1
1,858,479	+		IAI47_08785	0.81	+2.8
1,858,480	-		IAI47_08785	0.81	+0.1
1,858,480	-		IAI47_08785	0.81	-0.2
1,858,482	+		IAI47_08785	0.81	+0.1
1,858,482	+		IAI47_08785	0.81	-0.3
1,858,482	+		IAI47_08785	0.81	+0.6
1,858,482	+		IAI47_08785	0.81	-0.5
1,858,483	-		IAI47_08785	0.81	+0.8
1,858,503	+		IAI47_08785	0.83	+0.3
1,858,504	-		IAI47_08785	0.83	+0.5
1,858,504	-		IAI47_08785	0.83	+1.4
1,858,556	+		IAI47_08785	0.86	+0.0
1,858,557	+		IAI47_08785	0.87	-2.6
1,858,557	+		IAI47_08785	0.87	+2.0
1,858,557	+		IAI47_08785	0.87	+0.1
1,858,592	+		IAI47_08785	0.89	-1.2
1,858,592	+		IAI47_08785	0.89	-1.6
1,858,592	+		IAI47_08785	0.89	-0.8
1,858,593	-		IAI47_08785	0.89	+0.3
1,858,593	-		IAI47_08785	0.89	+0.0
1,858,593	-		IAI47_08785	0.89	+2.8
1,858,593	-		IAI47_08785	0.89	+2.2
1,858,593	-		IAI47_08785	0.89	-1.3
1,858,600	+		IAI47_08785	0.90	+3.7
1,858,600	+		IAI47_08785	0.90	-0.2
1,858,600	+		IAI47_08785	0.90	+1.0
1,858,601	-		IAI47_08785	0.90	-0.2
1,858,662	+				-0.3
1,858,664	-				+0.8
1,858,686	+				+0.4
1,858,735	-				+1.9
1,858,735	-				+0.7
1,858,760	+				+1.4
1,858,761	-				-0.6
1,858,784	+				+2.4
1,858,795	+				+1.4
1,858,795	+				+1.3
1,858,795	+				+0.8
1,858,795	+				+0.6
1,858,795	+				-0.9
1,858,796	-				-2.4
1,858,796	-				-0.3
1,858,798	+				-0.0
1,858,798	+				-0.9
1,858,798	+				+0.8
1,858,798	+				+0.3
1,858,798	+				-0.9
1,858,798	+				-0.8
1,858,798	+				+0.1
1,858,798	+				-0.2
1,858,798	+				+0.1
1,858,799	-				-0.3
1,858,799	-				-0.1
1,858,801	+				+0.7
1,858,801	+				+0.4
1,858,801	+				+0.5
1,858,801	+				-0.4
1,858,801	+				+1.7
1,858,801	+				-0.1
1,858,802	-				+1.2
1,858,802	-				-0.3
1,858,802	-				+0.1
1,858,840	-				+1.4
1,858,846	-				-0.9
1,858,846	-				+0.4
1,858,846	-				-0.1
1,858,986	+		IAI47_08790	0.11	-0.0
1,858,986	+		IAI47_08790	0.11	+0.4
1,859,021	+		IAI47_08790	0.17	+0.7
1,859,021	+		IAI47_08790	0.17	+0.2
1,859,021	+		IAI47_08790	0.17	-0.1
1,859,022	-		IAI47_08790	0.17	-0.7
1,859,022	-		IAI47_08790	0.17	+1.7
1,859,022	-		IAI47_08790	0.17	+0.5
1,859,022	-		IAI47_08790	0.17	-1.0
1,859,060	+		IAI47_08790	0.24	+0.8
1,859,060	+		IAI47_08790	0.24	-0.9
1,859,060	+		IAI47_08790	0.24	+2.1
1,859,060	+		IAI47_08790	0.24	-1.9
1,859,060	+		IAI47_08790	0.24	+0.3
1,859,061	-		IAI47_08790	0.24	+1.0
1,859,061	-		IAI47_08790	0.24	+0.6
1,859,061	-		IAI47_08790	0.24	-0.6
1,859,116	+		IAI47_08790	0.34	+0.1
1,859,116	+		IAI47_08790	0.34	+0.2
1,859,122	+		IAI47_08790	0.35	+0.1
1,859,122	+		IAI47_08790	0.35	-0.2
1,859,122	+		IAI47_08790	0.35	+1.5
1,859,122	+		IAI47_08790	0.35	+0.9
1,859,122	+		IAI47_08790	0.35	+0.2
1,859,123	-		IAI47_08790	0.35	+0.3
1,859,123	-		IAI47_08790	0.35	+0.8
1,859,123	-		IAI47_08790	0.35	+1.0
1,859,123	-		IAI47_08790	0.35	+0.7
1,859,123	-		IAI47_08790	0.35	+0.3
1,859,123	-		IAI47_08790	0.35	+1.5
1,859,130	-		IAI47_08790	0.36	-0.4
1,859,143	+		IAI47_08790	0.39	-1.4
1,859,143	+		IAI47_08790	0.39	+0.8
1,859,143	+		IAI47_08790	0.39	+0.2
1,859,207	+		IAI47_08790	0.50	+1.5
1,859,207	+		IAI47_08790	0.50	+0.9
1,859,208	-		IAI47_08790	0.50	-0.8
1,859,208	-		IAI47_08790	0.50	-0.6
1,859,208	-		IAI47_08790	0.50	-0.4
1,859,386	+		IAI47_08790	0.82	+0.8
1,859,386	+		IAI47_08790	0.82	+2.6
1,859,386	+		IAI47_08790	0.82	+0.9
1,859,387	-		IAI47_08790	0.82	-1.3
1,859,387	-		IAI47_08790	0.82	+0.9
1,859,517	+				+0.8
1,859,518	-				+0.2
1,859,518	-				+1.0
1,859,551	+				+0.9
1,859,552	-				+2.0
1,859,602	+				-0.4
1,859,602	+				+0.3
1,859,648	+		IAI47_08795	0.13	+1.8
1,859,648	+		IAI47_08795	0.13	-0.0
1,859,649	-		IAI47_08795	0.13	+1.5
1,859,672	+		IAI47_08795	0.14	+1.2
1,859,672	+		IAI47_08795	0.14	+0.5
1,859,673	-		IAI47_08795	0.15	+0.1
1,859,673	-		IAI47_08795	0.15	+2.1
1,859,673	-		IAI47_08795	0.15	-2.9
1,859,674	+		IAI47_08795	0.15	+0.0
1,859,674	+		IAI47_08795	0.15	-0.1
1,859,674	+		IAI47_08795	0.15	-1.5
1,859,675	-		IAI47_08795	0.15	+0.4
1,859,726	+		IAI47_08795	0.18	+1.7
1,859,726	+		IAI47_08795	0.18	+0.0
1,859,726	+		IAI47_08795	0.18	+0.8
1,859,726	+		IAI47_08795	0.18	+1.2
1,859,726	+		IAI47_08795	0.18	-0.6
1,859,726	+		IAI47_08795	0.18	+0.4
1,859,726	+		IAI47_08795	0.18	+0.4
1,859,726	+		IAI47_08795	0.18	+0.0
1,859,726	+		IAI47_08795	0.18	-0.8
1,859,727	-		IAI47_08795	0.18	-0.7
1,859,727	-		IAI47_08795	0.18	+0.4
1,859,727	-		IAI47_08795	0.18	+0.3
1,859,727	-		IAI47_08795	0.18	+0.2
1,859,727	-		IAI47_08795	0.18	+1.1
1,859,729	+		IAI47_08795	0.19	-0.2
1,859,729	+		IAI47_08795	0.19	+0.3
1,859,729	+		IAI47_08795	0.19	-1.3
1,859,729	+		IAI47_08795	0.19	+0.3
1,859,730	-		IAI47_08795	0.19	+1.3
1,859,730	-		IAI47_08795	0.19	+1.5
1,859,747	+		IAI47_08795	0.20	-0.8
1,859,747	+		IAI47_08795	0.20	+0.6
1,859,747	+		IAI47_08795	0.20	+1.2
1,859,748	-		IAI47_08795	0.20	+0.2
1,859,748	-		IAI47_08795	0.20	-0.1
1,859,790	+		IAI47_08795	0.23	-0.9
1,859,791	-		IAI47_08795	0.23	+1.1
1,859,817	+		IAI47_08795	0.25	-1.1
1,859,817	+		IAI47_08795	0.25	-0.7
1,859,817	+		IAI47_08795	0.25	+0.1
1,859,817	+		IAI47_08795	0.25	+0.1
1,859,818	-		IAI47_08795	0.25	+1.0
1,859,892	-		IAI47_08795	0.30	-1.8
1,859,922	-		IAI47_08795	0.33	+0.4
1,860,042	-		IAI47_08795	0.41	-1.4
1,860,068	+		IAI47_08795	0.43	+1.7
1,860,069	-		IAI47_08795	0.43	+3.1
1,860,226	-		IAI47_08795	0.55	+1.1
1,860,232	+		IAI47_08795	0.55	+0.4
1,860,233	-		IAI47_08795	0.55	+0.4
1,860,251	+		IAI47_08795	0.56	+0.0
1,860,251	+		IAI47_08795	0.56	-0.2
1,860,251	+		IAI47_08795	0.56	+2.9
1,860,251	+		IAI47_08795	0.56	+0.2
1,860,251	+		IAI47_08795	0.56	+1.3
1,860,252	-		IAI47_08795	0.57	-0.5
1,860,252	-		IAI47_08795	0.57	+0.4
1,860,252	-		IAI47_08795	0.57	+0.6
1,860,252	-		IAI47_08795	0.57	-0.9
1,860,252	-		IAI47_08795	0.57	+2.4
1,860,252	-		IAI47_08795	0.57	+1.2
1,860,252	-		IAI47_08795	0.57	-0.8
1,860,253	+		IAI47_08795	0.57	-0.2
1,860,253	+				+3.0
1,860,253	+		IAI47_08795	0.57	+1.5
1,860,254	-		IAI47_08795	0.57	+2.3
1,860,254	-		IAI47_08795	0.57	-1.1
1,860,254	-		IAI47_08795	0.57	+0.8
1,860,284	-		IAI47_08795	0.59	+0.9
1,860,292	+		IAI47_08795	0.59	+0.8
1,860,292	+		IAI47_08795	0.59	+1.1
1,860,292	+		IAI47_08795	0.59	+0.7
1,860,292	+		IAI47_08795	0.59	+0.3
1,860,293	-		IAI47_08795	0.59	-0.2
1,860,293	-		IAI47_08795	0.59	+0.6
1,860,293	-		IAI47_08795	0.59	+0.3
1,860,293	-		IAI47_08795	0.59	-0.2
1,860,299	+		IAI47_08795	0.60	+1.0
1,860,299	+		IAI47_08795	0.60	+0.1
1,860,299	+		IAI47_08795	0.60	+1.2
1,860,299	+		IAI47_08795	0.60	-1.0
1,860,300	-		IAI47_08795	0.60	+0.8
1,860,300	-		IAI47_08795	0.60	-0.2
1,860,300	-		IAI47_08795	0.60	-1.1
1,860,300	-		IAI47_08795	0.60	+0.2
1,860,300	-		IAI47_08795	0.60	-0.3
1,860,300	-		IAI47_08795	0.60	-0.8
1,860,302	+		IAI47_08795	0.60	+2.4
1,860,302	+		IAI47_08795	0.60	-0.4
1,860,302	+		IAI47_08795	0.60	-0.4
1,860,303	-		IAI47_08795	0.60	+1.2
1,860,303	-		IAI47_08795	0.60	-0.3
1,860,303	-		IAI47_08795	0.60	+0.9
1,860,303	-		IAI47_08795	0.60	+0.6
1,860,303	-		IAI47_08795	0.60	+1.7
1,860,334	-		IAI47_08795	0.62	+0.7
1,860,345	+		IAI47_08795	0.63	+0.9
1,860,346	-		IAI47_08795	0.63	+1.7
1,860,445	+		IAI47_08795	0.71	-0.6
1,860,445	+		IAI47_08795	0.71	-0.7
1,860,445	+		IAI47_08795	0.71	+0.8
1,860,445	+		IAI47_08795	0.71	-0.8
1,860,446	-		IAI47_08795	0.71	-0.5
1,860,446	-		IAI47_08795	0.71	+1.0
1,860,446	-		IAI47_08795	0.71	+0.5
1,860,446	-		IAI47_08795	0.71	-0.5
1,860,471	-		IAI47_08795	0.72	-0.8
1,860,527	-		IAI47_08795	0.76	+1.3
1,860,647	+		IAI47_08795	0.85	+2.3
1,860,821	+				+0.9
1,860,821	+				+0.3
1,860,822	-				-1.3
1,860,823	+				-0.4
1,860,823	+				-1.6
1,860,823	+				-1.8
1,860,823	+				-0.2
1,860,823	+				+0.4
1,860,824	-				+0.3
1,860,824	-				-0.8
1,860,824	-				+1.0
1,860,873	+				+0.8
1,860,873	+				+1.6
1,860,873	+				+1.1
1,860,873	+				+0.2
1,860,874	-				+0.2
1,860,874	-				+0.7
1,860,895	-				-0.1
1,860,895	-				+1.5
1,860,918	+				-0.8
1,860,919	-				+1.4
1,860,919	-				-1.6
1,860,919	-				-0.2
1,860,919	-				-0.8
1,860,934	-				+0.4
1,860,967	+				-0.3
1,860,968	-				+0.0
1,861,018	+		IAI47_08800	0.29	-0.7
1,861,019	-		IAI47_08800	0.29	-1.1
1,861,019	-		IAI47_08800	0.29	+0.0
1,861,019	-		IAI47_08800	0.29	-0.8
1,861,019	-		IAI47_08800	0.29	+1.2
1,861,019	-		IAI47_08800	0.29	-1.8
1,861,109	-		IAI47_08800	0.75	-0.6
1,861,109	-		IAI47_08800	0.75	+2.2
1,861,109	-		IAI47_08800	0.75	+1.5
1,861,154	+				+0.3
1,861,170	+				-1.2
1,861,203	+				+0.1
1,861,203	+				-1.3
1,861,214	+		IAI47_08805	0.13	+0.6
1,861,214	+		IAI47_08805	0.13	+1.4
1,861,215	-		IAI47_08805	0.13	-0.6
1,861,215	-		IAI47_08805	0.13	+0.1
1,861,235	-		IAI47_08805	0.19	-0.8
1,861,235	-		IAI47_08805	0.19	-0.5
1,861,306	+		IAI47_08805	0.40	+1.7
1,861,307	-		IAI47_08805	0.40	+2.4
1,861,307	-		IAI47_08805	0.40	+0.2
1,861,307	-		IAI47_08805	0.40	+0.1
1,861,310	+		IAI47_08805	0.41	-0.4
1,861,311	-		IAI47_08805	0.41	-0.2
1,861,345	+		IAI47_08805	0.51	+0.4
1,861,346	-		IAI47_08805	0.51	+0.6
1,861,346	-		IAI47_08805	0.51	-1.3
1,861,443	+		IAI47_08805	0.79	-0.1
1,861,443	+		IAI47_08805	0.79	+1.4
1,861,444	-		IAI47_08805	0.80	-0.2
1,861,444	-		IAI47_08805	0.80	-0.3
1,861,444	-		IAI47_08805	0.80	+0.5
1,861,444	-		IAI47_08805	0.80	+0.4
1,861,446	+		IAI47_08805	0.80	+0.5
1,861,446	+		IAI47_08805	0.80	-1.3
1,861,446	+		IAI47_08805	0.80	+0.4
1,861,447	-		IAI47_08805	0.81	+0.4
1,861,447	-		IAI47_08805	0.81	-2.5
1,861,447	-		IAI47_08805	0.81	+1.4
1,861,459	+		IAI47_08805	0.84	-1.4
1,861,459	+		IAI47_08805	0.84	-1.5
1,861,460	-		IAI47_08805	0.84	-0.8
1,861,480	+				+2.4
1,861,480	+				+0.5
1,861,480	+				-0.0
1,861,480	+				+0.6
1,861,480	+				+0.7
1,861,480	+				+0.1
1,861,480	+				+1.3
1,861,480	+				+0.8
1,861,480	+				+2.0
1,861,480	+				-1.3
1,861,481	-				+3.0
1,861,481	-				-0.2
1,861,481	-				+0.5
1,861,481	-				+0.2
1,861,481	-				+1.2
1,861,481	-				-0.9
1,861,481	-				-0.4
1,861,481	-				+1.7
1,861,507	+				+0.3
1,861,508	-				+0.8
1,861,508	-				+0.3
1,861,508	-				+1.4
1,861,508	-				+0.7
1,861,508	-				+1.3
1,861,508	-				+0.2
1,861,529	+				-0.4
1,861,529	+				-0.2
1,861,529	+				-0.8
1,861,530	-				-0.8
1,861,540	+				+2.6
1,861,540	+				-0.6
1,861,540	+				+0.1
1,861,541	-				+0.6
1,861,560	-				+0.4
1,861,575	+				+0.9
1,861,575	+				+0.6
1,861,575	+				-0.5
1,861,576	-				-1.7
1,861,576	-				-0.1
1,861,576	-				-0.1
1,861,582	+				+0.1
1,861,698	-		IAI47_08810	0.33	+0.9
1,861,712	+		IAI47_08810	0.36	-0.6
1,861,712	+		IAI47_08810	0.36	+0.7
1,861,712	+		IAI47_08810	0.36	-1.2
1,861,712	+		IAI47_08810	0.36	+0.9
1,861,713	-		IAI47_08810	0.37	+0.3
1,861,713	-		IAI47_08810	0.37	+1.1
1,861,758	-		IAI47_08810	0.49	-1.1
1,861,758	-		IAI47_08810	0.49	-1.0
1,861,758	-		IAI47_08810	0.49	+1.2
1,861,799	+		IAI47_08810	0.61	+0.2
1,861,799	+		IAI47_08810	0.61	-0.6
1,861,799	+		IAI47_08810	0.61	+0.1
1,861,800	-		IAI47_08810	0.61	-0.4
1,861,800	-		IAI47_08810	0.61	-0.1
1,861,800	-		IAI47_08810	0.61	+0.1