Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06165 and H281DRAFT_06166 are separated by 12 nucleotides H281DRAFT_06166 and H281DRAFT_06167 are separated by 16 nucleotides H281DRAFT_06167 and H281DRAFT_06168 are separated by 97 nucleotides
H281DRAFT_06165: H281DRAFT_06165 - hypothetical protein, at 57,712 to 58,581
_06165
H281DRAFT_06166: H281DRAFT_06166 - Superfamily I DNA or RNA helicase, at 58,594 to 60,285
_06166
H281DRAFT_06167: H281DRAFT_06167 - hypothetical protein, at 60,302 to 61,030
_06167
H281DRAFT_06168: H281DRAFT_06168 - hypothetical protein, at 61,128 to 61,640
_06168
Position (kb) 58
59
60
61 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 57.663 kb on + strand at 57.664 kb on - strand at 57.664 kb on - strand at 57.664 kb on - strand at 57.695 kb on + strand at 57.695 kb on + strand at 57.696 kb on - strand at 57.711 kb on + strand at 57.712 kb on - strand at 58.096 kb on - strand, within H281DRAFT_06165 at 58.376 kb on - strand, within H281DRAFT_06165 at 58.690 kb on - strand at 58.862 kb on + strand, within H281DRAFT_06166 at 58.875 kb on + strand, within H281DRAFT_06166 at 59.027 kb on - strand, within H281DRAFT_06166 at 59.027 kb on - strand, within H281DRAFT_06166 at 59.035 kb on + strand, within H281DRAFT_06166 at 59.182 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.342 kb on - strand, within H281DRAFT_06166 at 59.606 kb on - strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.609 kb on - strand, within H281DRAFT_06166 at 59.896 kb on + strand, within H281DRAFT_06166 at 59.919 kb on - strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 60.028 kb on + strand, within H281DRAFT_06166 at 60.124 kb on - strand at 60.190 kb on + strand at 60.300 kb on + strand at 60.388 kb on - strand, within H281DRAFT_06167 at 60.431 kb on + strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.659 kb on + strand, within H281DRAFT_06167 at 60.823 kb on + strand, within H281DRAFT_06167 at 60.836 kb on + strand, within H281DRAFT_06167 at 60.837 kb on - strand, within H281DRAFT_06167 at 60.891 kb on - strand, within H281DRAFT_06167 at 61.029 kb on - strand at 61.138 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 57,663 + -0.1 57,664 - -0.5 57,664 - -1.3 57,664 - +0.5 57,695 + -1.0 57,695 + +0.3 57,696 - -1.0 57,711 + -0.3 57,712 - +0.1 58,096 - H281DRAFT_06165 0.44 +0.4 58,376 - H281DRAFT_06165 0.76 -0.6 58,690 - +1.3 58,862 + H281DRAFT_06166 0.16 -0.0 58,875 + H281DRAFT_06166 0.17 +0.1 59,027 - H281DRAFT_06166 0.26 -1.3 59,027 - H281DRAFT_06166 0.26 +1.2 59,035 + H281DRAFT_06166 0.26 +2.0 59,182 + H281DRAFT_06166 0.35 +1.5 59,254 + H281DRAFT_06166 0.39 -0.2 59,254 + H281DRAFT_06166 0.39 +0.2 59,254 + H281DRAFT_06166 0.39 -1.8 59,342 - H281DRAFT_06166 0.44 +0.0 59,606 - H281DRAFT_06166 0.60 +0.8 59,608 + H281DRAFT_06166 0.60 +0.0 59,608 + H281DRAFT_06166 0.60 +0.2 59,609 - H281DRAFT_06166 0.60 +1.7 59,896 + H281DRAFT_06166 0.77 +1.7 59,919 - H281DRAFT_06166 0.78 -0.1 59,980 + H281DRAFT_06166 0.82 -1.0 59,980 + H281DRAFT_06166 0.82 -0.4 59,981 - H281DRAFT_06166 0.82 -0.5 59,981 - H281DRAFT_06166 0.82 +2.0 60,028 + H281DRAFT_06166 0.85 +0.1 60,124 - -3.9 60,190 + +0.7 60,300 + +0.5 60,388 - H281DRAFT_06167 0.12 +0.9 60,431 + H281DRAFT_06167 0.18 -0.2 60,462 - H281DRAFT_06167 0.22 +0.1 60,462 - H281DRAFT_06167 0.22 +0.5 60,659 + H281DRAFT_06167 0.49 +0.3 60,823 + H281DRAFT_06167 0.71 +1.3 60,836 + H281DRAFT_06167 0.73 +0.8 60,837 - H281DRAFT_06167 0.73 +0.9 60,891 - H281DRAFT_06167 0.81 +0.4 61,029 - +0.0 61,138 - -0.8 61,152 - -0.3 61,152 - +0.9 61,152 - -0.5 61,152 - +0.8
Or see this region's nucleotide sequence