Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05232 and H281DRAFT_05233 are separated by 123 nucleotides H281DRAFT_05233 and H281DRAFT_05234 overlap by 4 nucleotides
H281DRAFT_05232: H281DRAFT_05232 - putative serine protein kinase, PrkA, at 196,841 to 198,763
_05232
H281DRAFT_05233: H281DRAFT_05233 - hypothetical protein, at 198,887 to 200,158
_05233
H281DRAFT_05234: H281DRAFT_05234 - Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation, at 200,155 to 201,870
_05234
Position (kb) 198
199
200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 197.892 kb on + strand, within H281DRAFT_05232 at 197.990 kb on + strand, within H281DRAFT_05232 at 197.990 kb on + strand, within H281DRAFT_05232 at 197.990 kb on + strand, within H281DRAFT_05232 at 198.227 kb on + strand, within H281DRAFT_05232 at 198.228 kb on - strand, within H281DRAFT_05232 at 198.312 kb on - strand, within H281DRAFT_05232 at 198.344 kb on + strand, within H281DRAFT_05232 at 198.353 kb on + strand, within H281DRAFT_05232 at 198.353 kb on + strand, within H281DRAFT_05232 at 198.353 kb on + strand, within H281DRAFT_05232 at 198.354 kb on - strand, within H281DRAFT_05232 at 198.557 kb on + strand, within H281DRAFT_05232 at 198.832 kb on + strand at 198.832 kb on + strand at 198.832 kb on + strand at 198.852 kb on + strand at 198.853 kb on - strand at 198.974 kb on + strand at 198.974 kb on + strand at 198.975 kb on - strand at 198.975 kb on - strand at 199.026 kb on + strand, within H281DRAFT_05233 at 199.026 kb on + strand, within H281DRAFT_05233 at 199.027 kb on - strand, within H281DRAFT_05233 at 199.045 kb on + strand, within H281DRAFT_05233 at 199.046 kb on - strand, within H281DRAFT_05233 at 199.133 kb on + strand, within H281DRAFT_05233 at 199.372 kb on + strand, within H281DRAFT_05233 at 199.733 kb on + strand, within H281DRAFT_05233 at 199.901 kb on + strand, within H281DRAFT_05233 at 199.994 kb on + strand, within H281DRAFT_05233 at 199.995 kb on - strand, within H281DRAFT_05233 at 200.346 kb on + strand, within H281DRAFT_05234 at 200.413 kb on + strand, within H281DRAFT_05234 at 200.424 kb on + strand, within H281DRAFT_05234 at 200.446 kb on + strand, within H281DRAFT_05234 at 200.446 kb on + strand, within H281DRAFT_05234 at 200.462 kb on - strand, within H281DRAFT_05234 at 200.509 kb on + strand, within H281DRAFT_05234 at 200.510 kb on - strand at 200.612 kb on - strand, within H281DRAFT_05234 at 200.647 kb on + strand, within H281DRAFT_05234 at 200.648 kb on - strand, within H281DRAFT_05234 at 200.712 kb on + strand, within H281DRAFT_05234 at 200.712 kb on + strand, within H281DRAFT_05234 at 200.734 kb on + strand, within H281DRAFT_05234 at 200.734 kb on + strand, within H281DRAFT_05234 at 200.735 kb on - strand, within H281DRAFT_05234 at 200.735 kb on - strand, within H281DRAFT_05234 at 200.777 kb on - strand, within H281DRAFT_05234 at 200.798 kb on - strand, within H281DRAFT_05234 at 200.798 kb on - strand, within H281DRAFT_05234 at 200.798 kb on - strand, within H281DRAFT_05234 at 200.876 kb on - strand, within H281DRAFT_05234 at 200.876 kb on - strand, within H281DRAFT_05234 at 200.891 kb on - strand, within H281DRAFT_05234 at 200.891 kb on - strand, within H281DRAFT_05234 at 200.892 kb on + strand, within H281DRAFT_05234 at 200.954 kb on - strand, within H281DRAFT_05234 at 201.149 kb on - strand, within H281DRAFT_05234
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 197,892 + H281DRAFT_05232 0.55 -0.7 197,990 + H281DRAFT_05232 0.60 -0.5 197,990 + H281DRAFT_05232 0.60 -0.8 197,990 + H281DRAFT_05232 0.60 -0.9 198,227 + H281DRAFT_05232 0.72 +0.2 198,228 - H281DRAFT_05232 0.72 -1.1 198,312 - H281DRAFT_05232 0.76 -0.1 198,344 + H281DRAFT_05232 0.78 -0.1 198,353 + H281DRAFT_05232 0.79 -0.2 198,353 + H281DRAFT_05232 0.79 -0.1 198,353 + H281DRAFT_05232 0.79 -0.1 198,354 - H281DRAFT_05232 0.79 -1.1 198,557 + H281DRAFT_05232 0.89 -1.1 198,832 + +0.6 198,832 + +0.1 198,832 + +0.0 198,852 + +0.3 198,853 - +0.9 198,974 + -1.1 198,974 + -0.4 198,975 - +0.1 198,975 - -1.1 199,026 + H281DRAFT_05233 0.11 -0.1 199,026 + H281DRAFT_05233 0.11 -0.4 199,027 - H281DRAFT_05233 0.11 -2.9 199,045 + H281DRAFT_05233 0.12 -1.5 199,046 - H281DRAFT_05233 0.12 +0.0 199,133 + H281DRAFT_05233 0.19 -0.6 199,372 + H281DRAFT_05233 0.38 -0.4 199,733 + H281DRAFT_05233 0.67 -0.1 199,901 + H281DRAFT_05233 0.80 -1.3 199,994 + H281DRAFT_05233 0.87 +0.6 199,995 - H281DRAFT_05233 0.87 -1.5 200,346 + H281DRAFT_05234 0.11 +0.8 200,413 + H281DRAFT_05234 0.15 -0.7 200,424 + H281DRAFT_05234 0.16 -0.0 200,446 + H281DRAFT_05234 0.17 -0.4 200,446 + H281DRAFT_05234 0.17 -0.5 200,462 - H281DRAFT_05234 0.18 -0.4 200,509 + H281DRAFT_05234 0.21 -2.4 200,510 - -0.5 200,612 - H281DRAFT_05234 0.27 -0.9 200,647 + H281DRAFT_05234 0.29 -0.7 200,648 - H281DRAFT_05234 0.29 -0.4 200,712 + H281DRAFT_05234 0.32 -0.5 200,712 + H281DRAFT_05234 0.32 -0.6 200,734 + H281DRAFT_05234 0.34 -0.4 200,734 + H281DRAFT_05234 0.34 -2.3 200,735 - H281DRAFT_05234 0.34 +0.2 200,735 - H281DRAFT_05234 0.34 -0.1 200,777 - H281DRAFT_05234 0.36 +0.4 200,798 - H281DRAFT_05234 0.37 -0.9 200,798 - H281DRAFT_05234 0.37 -1.0 200,798 - H281DRAFT_05234 0.37 +0.2 200,876 - H281DRAFT_05234 0.42 +0.3 200,876 - H281DRAFT_05234 0.42 -0.6 200,891 - H281DRAFT_05234 0.43 -2.7 200,891 - H281DRAFT_05234 0.43 -0.4 200,892 + H281DRAFT_05234 0.43 -0.7 200,954 - H281DRAFT_05234 0.47 -1.1 201,149 - H281DRAFT_05234 0.58 -0.4
Or see this region's nucleotide sequence