Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04656 and H281DRAFT_04657 are separated by 71 nucleotides H281DRAFT_04657 and H281DRAFT_04658 are separated by 334 nucleotides H281DRAFT_04658 and H281DRAFT_04659 are separated by 382 nucleotides
H281DRAFT_04656: H281DRAFT_04656 - Predicted transcriptional regulator, at 57,902 to 58,642
_04656
H281DRAFT_04657: H281DRAFT_04657 - hypothetical protein, at 58,714 to 59,097
_04657
H281DRAFT_04658: H281DRAFT_04658 - putative N6-adenine-specific DNA methylase, at 59,432 to 60,721
_04658
H281DRAFT_04659: H281DRAFT_04659 - hypothetical protein, at 61,104 to 61,886
_04659
Position (kb) 59
60
61 Strain fitness (log2 ratio) -2
-1
0
1
2 at 58.476 kb on + strand, within H281DRAFT_04656 at 58.477 kb on - strand, within H281DRAFT_04656 at 58.603 kb on - strand at 58.632 kb on + strand at 58.687 kb on - strand at 58.715 kb on + strand at 58.779 kb on - strand, within H281DRAFT_04657 at 58.779 kb on - strand, within H281DRAFT_04657 at 58.920 kb on + strand, within H281DRAFT_04657 at 59.024 kb on + strand, within H281DRAFT_04657 at 59.024 kb on + strand, within H281DRAFT_04657 at 59.185 kb on + strand at 59.186 kb on - strand at 59.187 kb on + strand at 59.188 kb on - strand at 59.188 kb on - strand at 59.247 kb on + strand at 59.345 kb on - strand at 59.373 kb on - strand at 59.396 kb on + strand at 59.428 kb on - strand at 59.922 kb on - strand, within H281DRAFT_04658 at 60.006 kb on + strand, within H281DRAFT_04658 at 60.007 kb on - strand, within H281DRAFT_04658 at 60.478 kb on - strand, within H281DRAFT_04658 at 60.478 kb on - strand, within H281DRAFT_04658 at 60.478 kb on - strand, within H281DRAFT_04658 at 60.758 kb on + strand at 60.759 kb on - strand at 60.763 kb on + strand at 60.858 kb on + strand at 60.858 kb on + strand at 60.916 kb on + strand at 60.917 kb on - strand at 60.944 kb on - strand at 60.951 kb on - strand at 60.951 kb on - strand at 61.035 kb on + strand at 61.035 kb on + strand at 61.106 kb on - strand at 61.358 kb on + strand, within H281DRAFT_04659 at 61.358 kb on + strand, within H281DRAFT_04659 at 61.359 kb on - strand, within H281DRAFT_04659 at 61.483 kb on + strand, within H281DRAFT_04659 at 61.483 kb on + strand, within H281DRAFT_04659 at 61.483 kb on + strand, within H281DRAFT_04659 at 61.496 kb on + strand, within H281DRAFT_04659
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 58,476 + H281DRAFT_04656 0.77 -1.2 58,477 - H281DRAFT_04656 0.78 +0.3 58,603 - -0.8 58,632 + +1.0 58,687 - +0.2 58,715 + +1.0 58,779 - H281DRAFT_04657 0.17 +0.0 58,779 - H281DRAFT_04657 0.17 -0.1 58,920 + H281DRAFT_04657 0.54 +0.6 59,024 + H281DRAFT_04657 0.81 +0.6 59,024 + H281DRAFT_04657 0.81 +0.3 59,185 + +0.8 59,186 - +0.6 59,187 + -0.2 59,188 - +1.0 59,188 - +1.6 59,247 + -0.6 59,345 - -0.4 59,373 - -1.0 59,396 + -0.0 59,428 - -1.2 59,922 - H281DRAFT_04658 0.38 +1.5 60,006 + H281DRAFT_04658 0.44 +0.3 60,007 - H281DRAFT_04658 0.45 -1.0 60,478 - H281DRAFT_04658 0.81 +1.1 60,478 - H281DRAFT_04658 0.81 +0.4 60,478 - H281DRAFT_04658 0.81 +0.0 60,758 + +0.4 60,759 - -0.2 60,763 + -0.5 60,858 + -0.9 60,858 + -2.4 60,916 + +0.2 60,917 - +2.2 60,944 - -0.3 60,951 - +0.9 60,951 - -0.2 61,035 + -0.2 61,035 + +0.0 61,106 - -0.0 61,358 + H281DRAFT_04659 0.32 -0.1 61,358 + H281DRAFT_04659 0.32 +0.3 61,359 - H281DRAFT_04659 0.33 +0.6 61,483 + H281DRAFT_04659 0.48 +0.4 61,483 + H281DRAFT_04659 0.48 -0.0 61,483 + H281DRAFT_04659 0.48 +0.3 61,496 + H281DRAFT_04659 0.50 +0.5
Or see this region's nucleotide sequence