Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03126 and H281DRAFT_03127 are separated by 1 nucleotides H281DRAFT_03127 and H281DRAFT_03128 are separated by 2 nucleotides H281DRAFT_03128 and H281DRAFT_03129 are separated by 15 nucleotides
H281DRAFT_03125: H281DRAFT_03125 - oligopeptide transport system ATP-binding protein, at 158,822 to 159,820
_03125
H281DRAFT_03126: H281DRAFT_03126 - oligopeptide transport system ATP-binding protein, at 159,817 to 160,818
_03126
H281DRAFT_03127: H281DRAFT_03127 - oligopeptide transport system permease protein, at 160,820 to 161,734
_03127
H281DRAFT_03128: H281DRAFT_03128 - oligopeptide transport system permease protein, at 161,737 to 162,675
_03128
H281DRAFT_03129: H281DRAFT_03129 - oligopeptide transport system substrate-binding protein, at 162,691 to 164,307
_03129
Position (kb) 160
161
162 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 159.821 kb on - strand at 159.821 kb on - strand at 160.074 kb on - strand, within H281DRAFT_03126 at 160.136 kb on + strand, within H281DRAFT_03126 at 160.136 kb on + strand, within H281DRAFT_03126 at 160.137 kb on - strand, within H281DRAFT_03126 at 160.371 kb on - strand, within H281DRAFT_03126 at 161.090 kb on - strand, within H281DRAFT_03127 at 161.236 kb on - strand, within H281DRAFT_03127 at 161.284 kb on - strand, within H281DRAFT_03127 at 161.296 kb on - strand, within H281DRAFT_03127 at 161.346 kb on + strand, within H281DRAFT_03127 at 161.844 kb on - strand, within H281DRAFT_03128 at 162.331 kb on + strand, within H281DRAFT_03128 at 162.480 kb on - strand, within H281DRAFT_03128 at 162.480 kb on - strand, within H281DRAFT_03128 at 162.518 kb on + strand, within H281DRAFT_03128 at 162.519 kb on - strand, within H281DRAFT_03128 at 162.707 kb on + strand at 162.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 159,821 - +0.0 159,821 - +0.2 160,074 - H281DRAFT_03126 0.26 +0.1 160,136 + H281DRAFT_03126 0.32 +0.4 160,136 + H281DRAFT_03126 0.32 -1.5 160,137 - H281DRAFT_03126 0.32 +0.6 160,371 - H281DRAFT_03126 0.55 -0.7 161,090 - H281DRAFT_03127 0.30 -0.1 161,236 - H281DRAFT_03127 0.45 -3.2 161,284 - H281DRAFT_03127 0.51 +0.0 161,296 - H281DRAFT_03127 0.52 +0.1 161,346 + H281DRAFT_03127 0.57 +0.6 161,844 - H281DRAFT_03128 0.11 -0.7 162,331 + H281DRAFT_03128 0.63 -1.2 162,480 - H281DRAFT_03128 0.79 +0.3 162,480 - H281DRAFT_03128 0.79 -0.0 162,518 + H281DRAFT_03128 0.83 -1.1 162,519 - H281DRAFT_03128 0.83 -2.4 162,707 + -1.2 162,708 - -0.9
Or see this region's nucleotide sequence