Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02863 and H281DRAFT_02864 are separated by 9 nucleotides H281DRAFT_02864 and H281DRAFT_02865 are separated by 0 nucleotides H281DRAFT_02865 and H281DRAFT_02866 overlap by 4 nucleotides
H281DRAFT_02863: H281DRAFT_02863 - precorrin-3B synthase, at 456,091 to 457,698
_02863
H281DRAFT_02864: H281DRAFT_02864 - precorrin-8X methylmutase, at 457,708 to 458,334
_02864
H281DRAFT_02865: H281DRAFT_02865 - precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase, at 458,335 to 459,075
_02865
H281DRAFT_02866: H281DRAFT_02866 - precorrin-3 methyltransferase (EC 2.1.1.131), at 459,072 to 460,826
_02866
Position (kb) 458
459
460 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 457.585 kb on + strand at 457.586 kb on - strand at 457.586 kb on - strand at 457.717 kb on + strand at 457.741 kb on + strand at 457.742 kb on - strand at 458.002 kb on - strand, within H281DRAFT_02864 at 458.254 kb on + strand, within H281DRAFT_02864 at 458.254 kb on + strand, within H281DRAFT_02864 at 458.254 kb on + strand, within H281DRAFT_02864 at 458.364 kb on - strand at 458.364 kb on - strand at 458.364 kb on - strand at 458.364 kb on - strand at 458.366 kb on - strand at 458.409 kb on - strand, within H281DRAFT_02865 at 458.450 kb on - strand, within H281DRAFT_02865 at 458.537 kb on - strand, within H281DRAFT_02865 at 458.575 kb on + strand, within H281DRAFT_02865 at 458.575 kb on + strand, within H281DRAFT_02865 at 458.618 kb on + strand, within H281DRAFT_02865 at 458.618 kb on + strand, within H281DRAFT_02865 at 458.693 kb on - strand, within H281DRAFT_02865 at 458.693 kb on - strand, within H281DRAFT_02865 at 458.698 kb on + strand, within H281DRAFT_02865 at 458.698 kb on + strand, within H281DRAFT_02865 at 458.699 kb on - strand, within H281DRAFT_02865 at 458.699 kb on - strand, within H281DRAFT_02865 at 458.699 kb on - strand, within H281DRAFT_02865 at 458.725 kb on + strand, within H281DRAFT_02865 at 459.032 kb on - strand at 459.142 kb on - strand at 459.228 kb on + strand at 459.229 kb on - strand at 459.518 kb on + strand, within H281DRAFT_02866 at 459.967 kb on + strand, within H281DRAFT_02866 at 459.968 kb on - strand, within H281DRAFT_02866 at 460.037 kb on - strand, within H281DRAFT_02866
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 457,585 + -3.0 457,586 - +0.1 457,586 - -1.0 457,717 + -0.4 457,741 + -0.7 457,742 - -0.9 458,002 - H281DRAFT_02864 0.47 -1.8 458,254 + H281DRAFT_02864 0.87 -4.2 458,254 + H281DRAFT_02864 0.87 -3.5 458,254 + H281DRAFT_02864 0.87 -0.5 458,364 - -1.4 458,364 - -0.8 458,364 - +0.1 458,364 - -2.8 458,366 - -0.6 458,409 - H281DRAFT_02865 0.10 -2.3 458,450 - H281DRAFT_02865 0.16 -1.7 458,537 - H281DRAFT_02865 0.27 -3.1 458,575 + H281DRAFT_02865 0.32 -0.3 458,575 + H281DRAFT_02865 0.32 -0.2 458,618 + H281DRAFT_02865 0.38 -1.0 458,618 + H281DRAFT_02865 0.38 -2.0 458,693 - H281DRAFT_02865 0.48 -1.7 458,693 - H281DRAFT_02865 0.48 -1.8 458,698 + H281DRAFT_02865 0.49 +0.8 458,698 + H281DRAFT_02865 0.49 -1.5 458,699 - H281DRAFT_02865 0.49 +1.1 458,699 - H281DRAFT_02865 0.49 -2.7 458,699 - H281DRAFT_02865 0.49 +0.8 458,725 + H281DRAFT_02865 0.53 -0.0 459,032 - -1.3 459,142 - -1.3 459,228 + -1.0 459,229 - -2.6 459,518 + H281DRAFT_02866 0.25 -1.1 459,967 + H281DRAFT_02866 0.51 +0.4 459,968 - H281DRAFT_02866 0.51 -0.4 460,037 - H281DRAFT_02866 0.55 -1.7
Or see this region's nucleotide sequence