Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02748 and H281DRAFT_02749 are separated by 929 nucleotides H281DRAFT_02749 and H281DRAFT_02750 are separated by 555 nucleotides
H281DRAFT_02748: H281DRAFT_02748 - Head domain of trimeric autotransporter adhesin, at 332,150 to 336,334
_02748
H281DRAFT_02749: H281DRAFT_02749 - undecaprenyl-diphosphatase, at 337,264 to 337,953
_02749
H281DRAFT_02750: H281DRAFT_02750 - hypothetical protein, at 338,509 to 339,222
_02750
Position (kb) 337
338 Strain fitness (log2 ratio) -2
-1
0
1 at 336.911 kb on + strand at 337.040 kb on + strand at 337.041 kb on - strand at 337.059 kb on - strand at 337.080 kb on + strand at 337.081 kb on - strand at 337.239 kb on - strand at 337.325 kb on + strand at 337.360 kb on + strand, within H281DRAFT_02749 at 337.361 kb on - strand, within H281DRAFT_02749 at 337.395 kb on - strand, within H281DRAFT_02749 at 337.395 kb on - strand, within H281DRAFT_02749 at 337.395 kb on - strand, within H281DRAFT_02749 at 337.536 kb on + strand, within H281DRAFT_02749 at 337.680 kb on - strand, within H281DRAFT_02749 at 337.872 kb on + strand, within H281DRAFT_02749 at 337.872 kb on + strand, within H281DRAFT_02749 at 337.873 kb on - strand, within H281DRAFT_02749 at 337.873 kb on - strand, within H281DRAFT_02749 at 337.873 kb on - strand, within H281DRAFT_02749 at 337.889 kb on + strand at 337.889 kb on + strand at 338.080 kb on + strand at 338.415 kb on + strand at 338.504 kb on + strand at 338.582 kb on - strand, within H281DRAFT_02750 at 338.889 kb on - strand, within H281DRAFT_02750
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 336,911 + -0.7 337,040 + +0.7 337,041 - +0.0 337,059 - +0.7 337,080 + -1.1 337,081 - +0.3 337,239 - +0.2 337,325 + +0.8 337,360 + H281DRAFT_02749 0.14 +0.6 337,361 - H281DRAFT_02749 0.14 -0.9 337,395 - H281DRAFT_02749 0.19 +0.1 337,395 - H281DRAFT_02749 0.19 +0.5 337,395 - H281DRAFT_02749 0.19 -2.2 337,536 + H281DRAFT_02749 0.39 -0.9 337,680 - H281DRAFT_02749 0.60 -0.2 337,872 + H281DRAFT_02749 0.88 -0.1 337,872 + H281DRAFT_02749 0.88 +0.1 337,873 - H281DRAFT_02749 0.88 +0.8 337,873 - H281DRAFT_02749 0.88 -1.0 337,873 - H281DRAFT_02749 0.88 +0.4 337,889 + -2.2 337,889 + -0.0 338,080 + +0.4 338,415 + +0.2 338,504 + -0.7 338,582 - H281DRAFT_02750 0.10 -0.0 338,889 - H281DRAFT_02750 0.53 -1.4
Or see this region's nucleotide sequence