Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02473 and H281DRAFT_02474 overlap by 4 nucleotides H281DRAFT_02474 and H281DRAFT_02475 are separated by 73 nucleotides H281DRAFT_02475 and H281DRAFT_02476 are separated by 36 nucleotides
H281DRAFT_02473: H281DRAFT_02473 - electron transfer flavoprotein alpha subunit apoprotein, at 44,222 to 45,391
_02473
H281DRAFT_02474: H281DRAFT_02474 - electron transfer flavoprotein beta subunit, at 45,388 to 46,164
_02474
H281DRAFT_02475: H281DRAFT_02475 - Rieske 2Fe-2S family protein, at 46,238 to 47,542
_02475
H281DRAFT_02476: H281DRAFT_02476 - Ferredoxin-NADP reductase, at 47,579 to 48,829
_02476
Position (kb) 46
47
48 Strain fitness (log2 ratio) -1
0
1
2 at 45.661 kb on + strand, within H281DRAFT_02474 at 45.896 kb on - strand, within H281DRAFT_02474 at 45.896 kb on - strand, within H281DRAFT_02474 at 46.290 kb on - strand at 46.290 kb on - strand at 46.311 kb on - strand at 46.463 kb on - strand, within H281DRAFT_02475 at 46.544 kb on - strand, within H281DRAFT_02475 at 46.572 kb on - strand, within H281DRAFT_02475 at 46.572 kb on - strand, within H281DRAFT_02475 at 46.606 kb on + strand, within H281DRAFT_02475 at 46.681 kb on + strand, within H281DRAFT_02475 at 46.682 kb on - strand, within H281DRAFT_02475 at 46.844 kb on + strand, within H281DRAFT_02475 at 46.912 kb on + strand, within H281DRAFT_02475 at 47.197 kb on + strand, within H281DRAFT_02475 at 47.197 kb on + strand, within H281DRAFT_02475 at 47.198 kb on - strand, within H281DRAFT_02475 at 47.200 kb on - strand, within H281DRAFT_02475 at 47.357 kb on + strand, within H281DRAFT_02475 at 47.387 kb on + strand, within H281DRAFT_02475 at 47.644 kb on + strand at 47.849 kb on + strand, within H281DRAFT_02476 at 47.852 kb on - strand, within H281DRAFT_02476 at 47.894 kb on - strand, within H281DRAFT_02476 at 48.142 kb on + strand, within H281DRAFT_02476 at 48.143 kb on - strand, within H281DRAFT_02476 at 48.329 kb on + strand, within H281DRAFT_02476 at 48.343 kb on - strand, within H281DRAFT_02476
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 45,661 + H281DRAFT_02474 0.35 +0.8 45,896 - H281DRAFT_02474 0.65 +1.0 45,896 - H281DRAFT_02474 0.65 -0.1 46,290 - +0.6 46,290 - -0.7 46,311 - -1.0 46,463 - H281DRAFT_02475 0.17 -0.7 46,544 - H281DRAFT_02475 0.23 -0.3 46,572 - H281DRAFT_02475 0.26 -0.8 46,572 - H281DRAFT_02475 0.26 -0.1 46,606 + H281DRAFT_02475 0.28 -1.4 46,681 + H281DRAFT_02475 0.34 -1.6 46,682 - H281DRAFT_02475 0.34 -0.1 46,844 + H281DRAFT_02475 0.46 -0.6 46,912 + H281DRAFT_02475 0.52 -0.3 47,197 + H281DRAFT_02475 0.73 +0.0 47,197 + H281DRAFT_02475 0.73 +0.5 47,198 - H281DRAFT_02475 0.74 -0.5 47,200 - H281DRAFT_02475 0.74 -0.2 47,357 + H281DRAFT_02475 0.86 +0.1 47,387 + H281DRAFT_02475 0.88 -0.2 47,644 + +0.5 47,849 + H281DRAFT_02476 0.22 -0.8 47,852 - H281DRAFT_02476 0.22 -0.6 47,894 - H281DRAFT_02476 0.25 -0.3 48,142 + H281DRAFT_02476 0.45 +0.2 48,143 - H281DRAFT_02476 0.45 -0.5 48,329 + H281DRAFT_02476 0.60 +1.1 48,343 - H281DRAFT_02476 0.61 +2.0
Or see this region's nucleotide sequence